RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 GAL3ST2Q9H3Q3 398 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 ADAMTSL3P82987 1691 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 TRPM3Q9HCF6 1732 aaPredicted RBP19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 MVDP53602 400 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 NTNG2Q96CW9 530 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 RAB40CQ96S21 281 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 NUP205Q92621 2012 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 SNCGO76070 127 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 TMIGD3P0DMS9 266 aaPredicted RBP19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 DRD3P35462 400 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 ZNF66Q6ZN08 573 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 CT55Q8WUE5 264 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 PARD6AQ9NPB6 346 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 GP1BAP07359 652 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 FGF8P55075 233 aaPredicted RBP19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 TRIP6Q15654 476 aaKnown RBP19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 ETFRF1Q6IPR1 90 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 ZNF425Q6IV72 752 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 SLC25A22Q9H936 323 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 TTC3P53804 2025 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 K7EQS6 105 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 PDCD6O75340 191 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 SRD5A2P31213 254 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 SOX8P57073 446 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 ZNF141Q15928 474 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 GPR87Q9BY21 358 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 COL22A1Q8NFW1 1626 aaPredicted RBP19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 ASB10Q8WXI3 467 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 NAT8BQ9UHF3 227 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 GNG4P50150 75 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 RPS4XP62701 263 aaKnown RBP19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 KLHDC1Q8N7A1 406 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 WDR34Q96EX3 536 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 KIF13AQ9H1H9 1805 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 MAP1LC3B2A6NCE7 125 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 FAM157AC9JC47 383 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 HLXQ14774 488 aaPredicted RBP19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 ZNF683Q8IZ20 524 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 ZNF707Q96C28 371 aaPredicted RBP19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 MAP1LC3BQ9GZQ8 125 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 CXXC4Q9H2H0 198 aa19.65■□□□□ 0.74
TM9SF3-201ENST00000371142 CLRN3Q8NCR9 226 aa19.64■□□□□ 0.74
TM9SF3-201ENST00000371142 OR8B12Q8NGG6 310 aa19.64■□□□□ 0.74
TM9SF3-201ENST00000371142 CYR61O00622 381 aa19.64■□□□□ 0.73
TM9SF3-201ENST00000371142 USF1P22415 310 aaPredicted RBP19.64■□□□□ 0.73
TM9SF3-201ENST00000371142 SIRT3Q9NTG7 399 aaPredicted RBP19.64■□□□□ 0.73
TM9SF3-201ENST00000371142 RNF24Q9Y225 148 aa19.64■□□□□ 0.73
TM9SF3-201ENST00000371142 CDK5RAP2Q96SN8 1893 aa19.64■□□□□ 0.73
TM9SF3-201ENST00000371142 ZNF737O75373 536 aa19.64■□□□□ 0.73
TM9SF3-201ENST00000371142 TRAT1Q6PIZ9 186 aa19.64■□□□□ 0.73
TM9SF3-201ENST00000371142 ETV3LQ6ZN32 361 aa19.64■□□□□ 0.73
TM9SF3-201ENST00000371142 OR5D13Q8NGL4 314 aa19.64■□□□□ 0.73
TM9SF3-201ENST00000371142 VAMP8Q9BV40 100 aa19.64■□□□□ 0.73
TM9SF3-201ENST00000371142 WSB1Q9Y6I7 421 aa19.64■□□□□ 0.73
TM9SF3-201ENST00000371142 ZNF260Q3ZCT1 412 aa19.64■□□□□ 0.73
TM9SF3-201ENST00000371142 PECRQ9BY49 303 aa19.64■□□□□ 0.73
TM9SF3-201ENST00000371142 HNRNPA3P51991 378 aaKnown RBP19.64■□□□□ 0.73
TM9SF3-201ENST00000371142 PRRX1P54821 245 aa19.64■□□□□ 0.73
TM9SF3-201ENST00000371142 RHOBP62745 196 aa19.64■□□□□ 0.73
TM9SF3-201ENST00000371142 UQCC3Q6UW78 93 aa19.64■□□□□ 0.73
TM9SF3-201ENST00000371142 PRR13Q9NZ81 148 aa19.64■□□□□ 0.73
TM9SF3-201ENST00000371142 ZP3P21754 424 aa19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 KIR2DS2P43631 304 aa19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 NEIL1Q96FI4 390 aaPredicted RBP19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 NPTNQ9Y639 398 aa19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 SCGB1C2P0DMR2 95 aa19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 OR8D4Q8NGM9 314 aa19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 hADV38S2A0JD32 116 aa19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 ORM2P19652 201 aa19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 LYZP61626 148 aa19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 RNF212Q495C1 297 aa19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 DEGS2Q6QHC5 323 aa19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 Q7L0L9 218 aa19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 POMT1Q9Y6A1 747 aa19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 DNASE2O00115 360 aaPredicted RBP19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 TOMM20LQ6UXN7 152 aa19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 SLC45A2Q9UMX9 530 aa19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 KIAA1324LA8MWY0 1029 aaPredicted RBP19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 HOXC4P09017 264 aaPredicted RBP19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 HIST1H3AP68431 136 aa19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 LYPD8Q6UX82 237 aa19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 SEBOXQ9HB31 216 aaPredicted RBP19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 LHX9Q9NQ69 397 aa19.63■□□□□ 0.73
TM9SF3-201ENST00000371142 WDR31Q8NA23 367 aa19.62■□□□□ 0.73
TM9SF3-201ENST00000371142 CLLU1Q5K131 121 aa19.62■□□□□ 0.73
TM9SF3-201ENST00000371142 COX14Q96I36 57 aa19.62■□□□□ 0.73
TM9SF3-201ENST00000371142 FKBP11Q9NYL4 201 aa19.62■□□□□ 0.73
TM9SF3-201ENST00000371142 TNRC6CQ9HCJ0 1690 aaKnown RBP19.62■□□□□ 0.73
TM9SF3-201ENST00000371142 TMEM241Q24JQ0 296 aa19.62■□□□□ 0.73
TM9SF3-201ENST00000371142 GALP22466 123 aa19.62■□□□□ 0.73
TM9SF3-201ENST00000371142 TNXAQ16473 311 aa19.62■□□□□ 0.73
TM9SF3-201ENST00000371142 C11orf91Q3C1V1 193 aa19.62■□□□□ 0.73
TM9SF3-201ENST00000371142 TOLLIPQ9H0E2 274 aa19.62■□□□□ 0.73
TM9SF3-201ENST00000371142 MMP24Q9Y5R2 645 aa19.62■□□□□ 0.73
TM9SF3-201ENST00000371142 K7ESF4 209 aa19.62■□□□□ 0.73
TM9SF3-201ENST00000371142 NTN1O95631 604 aa19.62■□□□□ 0.73
TM9SF3-201ENST00000371142 CD200P41217 278 aa19.62■□□□□ 0.73
TM9SF3-201ENST00000371142 ZIC1Q15915 447 aa19.62■□□□□ 0.73
TM9SF3-201ENST00000371142 AMMECR1Q9Y4X0 333 aaPredicted RBP19.62■□□□□ 0.73
TM9SF3-201ENST00000371142 A0A1W2PN81 502 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms