RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 VWA1Q6PCB0 445 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 TRAT1Q6PIZ9 186 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 MEX3BQ6ZN04 569 aaKnown RBP7.5□□□□□ -1.21
TPM3-213ENST00000368545 COLCA1Q6ZS62 124 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 LYPD6Q86Y78 171 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 C17orf78Q8N4C9 275 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 C19orf18Q8NEA5 215 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 OR4M2Q8NGB6 313 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 SYNPRQ8TBG9 265 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 APOBEC3DQ96AK3 386 aaPredicted RBP7.5□□□□□ -1.21
TPM3-213ENST00000368545 SGK3Q96BR1 496 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 PRR25Q96S07 402 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 SFXN3Q9BWM7 321 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 B3GNT2Q9NY97 397 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 FBXL17Q9UF56 701 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 PIGLQ9Y2B2 252 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 FAM215AQ9Y5M1 114 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 INTS1Q8N201 2190 aaKnown RBP7.5□□□□□ -1.21
TPM3-213ENST00000368545 C5orf49A4QMS7 147 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 CCL21O00585 134 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 RAD51DO75771 328 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 MBPP02686 304 aaPredicted RBP7.49□□□□□ -1.21
TPM3-213ENST00000368545 HCKP08631 526 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 ANOS1P23352 680 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 INPP1P49441 399 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 MFAP4P55083 255 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 MRPS10P82664 201 aaKnown RBP7.49□□□□□ -1.21
TPM3-213ENST00000368545 RIPPLY1Q0D2K3 151 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 P2RY6Q15077 328 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 OR8B8Q15620 311 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 HIKESHIQ53FT3 197 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 C9orf152Q5JTZ5 239 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 RTL6Q6ICC9 239 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 Q6ZNX1 250 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 PNLDC1Q8NA58 520 aaKnown RBP7.49□□□□□ -1.21
TPM3-213ENST00000368545 OR51D1Q8NGF3 324 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 OR52N4Q8NGI2 321 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 SLC25A28Q96A46 364 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 PHF21AQ96BD5 680 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 POM121L2Q96KW2 1035 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 TECTBQ96PL2 329 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 MOV10Q9HCE1 1003 aaKnown RBP7.49□□□□□ -1.21
TPM3-213ENST00000368545 LOC100509620A0A075B734 347 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 A0A0A6YYH2 397 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 hCG_38984A0A1B0GV85 526 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 C5orf63A6NC05 138 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 A6NIN4 97 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 A6NJ64 397 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 LYZL6O75951 148 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 CGAP01215 116 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 FOXF2Q12947 444 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 FOXL1Q12952 345 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 ASAH1Q13510 395 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 GABRA6Q16445 453 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 TBC1D28Q2M2D7 210 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 C2orf76Q3KRA6 126 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 TMEM69Q5SWH9 247 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 MDP1Q86V88 176 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 PRIMA1Q86XR5 153 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 ZNF584Q8IVC4 421 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 OR5AS1Q8N127 324 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 GABRG1Q8N1C3 465 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 OR2AE1Q8NHA4 323 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 RFT1Q96AA3 541 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 SPSB1Q96BD6 273 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 STARD4Q96DR4 205 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 NOX3Q9HBY0 568 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 RHBDD3Q9Y3P4 386 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 BOD1L1Q8NFC6 3051 aa7.49□□□□□ -1.21
TPM3-213ENST00000368545 TMEM272A0A1B0GTI8 110 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 RNF212BA8MTL3 300 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 GSTZ1O43708 216 aaPredicted RBP7.48□□□□□ -1.21
TPM3-213ENST00000368545 SCGNO76038 276 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 UBBP0CG47 229 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 CCNOP22674 350 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 CDK2P24941 298 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 CEACAM8P31997 349 aaPredicted RBP7.48□□□□□ -1.21
TPM3-213ENST00000368545 FAM3AP98173 230 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 CLVS2Q5SYC1 327 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 GFRALQ6UXV0 394 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 SLC30A7Q8NEW0 376 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 OR4D6Q8NGJ1 314 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 OR5L1Q8NGL2 311 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 C17orf50Q8WW18 174 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 ZNF75AQ96N20 296 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 DIABLOQ9NR28 239 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 GHRLQ9UBU3 117 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 TBC1D24Q9ULP9 559 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 ZNF816-ZNF321PA0A0X1KG74 233 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 A0A1B0GVG6 124 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 XRCC3O43542 346 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 CTAG2O75638 210 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 TOXO94900 526 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 ZNF14P17017 642 aaPredicted RBP7.48□□□□□ -1.21
TPM3-213ENST00000368545 ACKR3P25106 362 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 ZNF92Q03936 586 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 MADCAM1Q13477 382 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 FAM189A2Q15884 450 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 TMEM42Q69YG0 159 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 AWAT2Q6E213 333 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms