RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 OR8U8P0C7N1 319 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 FMO3P31513 532 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 CEACAM3P40198 252 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 OPRL1P41146 370 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 MNDAP41218 407 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 HAAOP46952 286 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 MTNR1BP49286 362 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 HLA-DRB5Q30154 266 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 PRAMEF5Q5TYX0 476 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 RTN4RL2Q86UN3 420 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 THNSL2Q86YJ6 484 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 Q8N1Y9 231 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 OR8B12Q8NGG6 310 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 ST6GALNAC6Q969X2 333 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 ABHD6Q9BV23 337 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 ZNF286AQ9HBT8 521 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 PKHD1P08F94 4074 aa11.36□□□□□ -0.59
VAMP4-202ENST00000367740 TMEM82A0PJX8 343 aa11.36□□□□□ -0.59
VAMP4-202ENST00000367740 AP4M1O00189 453 aa11.36□□□□□ -0.59
VAMP4-202ENST00000367740 ERVK11-1P61568 191 aa11.36□□□□□ -0.59
VAMP4-202ENST00000367740 ESRRGP62508 458 aa11.36□□□□□ -0.59
VAMP4-202ENST00000367740 HAGHQ16775 308 aa11.36□□□□□ -0.59
VAMP4-202ENST00000367740 PLCXD3Q63HM9 321 aa11.36□□□□□ -0.59
VAMP4-202ENST00000367740 CCDC144NLQ6NUI1 221 aa11.36□□□□□ -0.59
VAMP4-202ENST00000367740 MOB3CQ70IA8 216 aa11.36□□□□□ -0.59
VAMP4-202ENST00000367740 FKBP9P1Q75LS8 142 aa11.36□□□□□ -0.59
VAMP4-202ENST00000367740 CBLL1Q75N03 491 aa11.36□□□□□ -0.59
VAMP4-202ENST00000367740 LYPD6Q86Y78 171 aa11.36□□□□□ -0.59
VAMP4-202ENST00000367740 OR56B4Q8NH76 319 aa11.36□□□□□ -0.59
VAMP4-202ENST00000367740 FAM81AQ8TBF8 368 aa11.36□□□□□ -0.59
VAMP4-202ENST00000367740 NKIRAS1Q9NYS0 192 aa11.36□□□□□ -0.59
VAMP4-202ENST00000367740 KIAA1456Q9P272 454 aa11.36□□□□□ -0.59
VAMP4-202ENST00000367740 GMPR2Q9P2T1 348 aaKnown RBP11.36□□□□□ -0.59
VAMP4-202ENST00000367740 TNCP24821 2201 aa11.36□□□□□ -0.59
VAMP4-202ENST00000367740 KIAA2026Q5HYC2 2103 aa11.35□□□□□ -0.59
VAMP4-202ENST00000367740 OOSP1A8MZH6 123 aa11.35□□□□□ -0.59
VAMP4-202ENST00000367740 H3BSH0 61 aa11.35□□□□□ -0.59
VAMP4-202ENST00000367740 OVOL1O14753 267 aa11.35□□□□□ -0.59
VAMP4-202ENST00000367740 TMEM11P17152 192 aa11.35□□□□□ -0.59
VAMP4-202ENST00000367740 CD34P28906 385 aa11.35□□□□□ -0.59
VAMP4-202ENST00000367740 GDNFP39905 211 aa11.35□□□□□ -0.59
VAMP4-202ENST00000367740 GPR12P47775 334 aa11.35□□□□□ -0.59
VAMP4-202ENST00000367740 CFHR3Q02985 330 aa11.35□□□□□ -0.59
VAMP4-202ENST00000367740 RPP25LQ8N5L8 163 aaKnown RBP11.35□□□□□ -0.59
VAMP4-202ENST00000367740 SLC37A3Q8NCC5 494 aa11.35□□□□□ -0.59
VAMP4-202ENST00000367740 OR6Q1Q8NGQ2 317 aa11.35□□□□□ -0.59
VAMP4-202ENST00000367740 OR52J3Q8NH60 311 aa11.35□□□□□ -0.59
VAMP4-202ENST00000367740 DCUN1D4Q92564 292 aa11.35□□□□□ -0.59
VAMP4-202ENST00000367740 RETNQ9HD89 108 aa11.35□□□□□ -0.59
VAMP4-202ENST00000367740 POLDIP2Q9Y2S7 368 aa11.35□□□□□ -0.59
VAMP4-202ENST00000367740 I3L521 148 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 SERPINA1P01009 418 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 H2BFMP0C1H6 154 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 CLUP10909 449 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 CDK2P24941 298 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 CNTFRP26992 372 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 MAP2K3P46734 347 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 ZNF616Q08AN1 781 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 HES1Q14469 280 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 UTF1Q5T230 341 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 OR52W1Q6IF63 320 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 ZNF573Q86YE8 665 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 OR1N2Q8NGR9 330 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 OR6K6Q8NGW6 343 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 OR6N2Q8NGY6 317 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 MYOZ3Q8TDC0 251 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 CREB3L1Q96BA8 519 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 SNX22Q96L94 193 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 DHRS1Q96LJ7 313 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 GON7Q9BXV9 100 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 GNB4Q9HAV0 340 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 NDUFAF4Q9P032 175 aa11.34□□□□□ -0.59
VAMP4-202ENST00000367740 DIRAS1O95057 198 aa11.33□□□□□ -0.6
VAMP4-202ENST00000367740 IGHG4P01861 327 aa11.33□□□□□ -0.6
VAMP4-202ENST00000367740 SNRPBP14678 240 aaKnown RBP11.33□□□□□ -0.6
VAMP4-202ENST00000367740 SPI1P17947 270 aa11.33□□□□□ -0.6
VAMP4-202ENST00000367740 MPZP25189 248 aa11.33□□□□□ -0.6
VAMP4-202ENST00000367740 PSMB8P28062 276 aa11.33□□□□□ -0.6
VAMP4-202ENST00000367740 GNB1P62873 340 aa11.33□□□□□ -0.6
VAMP4-202ENST00000367740 CBX1P83916 185 aa11.33□□□□□ -0.6
VAMP4-202ENST00000367740 GABPB1Q06547 395 aaPredicted RBP11.33□□□□□ -0.6
VAMP4-202ENST00000367740 RBM39Q14498 530 aaKnown RBP11.33□□□□□ -0.6
VAMP4-202ENST00000367740 HNF4GQ14541 408 aa11.33□□□□□ -0.6
VAMP4-202ENST00000367740 LINC01590Q5TEZ4 76 aa11.33□□□□□ -0.6
VAMP4-202ENST00000367740 HEPN1Q6WQI6 88 aa11.33□□□□□ -0.6
VAMP4-202ENST00000367740 TRAPPC6BQ86SZ2 158 aa11.33□□□□□ -0.6
VAMP4-202ENST00000367740 SGPP2Q8IWX5 399 aa11.33□□□□□ -0.6
VAMP4-202ENST00000367740 OR52N4Q8NGI2 321 aa11.33□□□□□ -0.6
VAMP4-202ENST00000367740 TRMT10AQ8TBZ6 339 aaKnown RBP11.33□□□□□ -0.6
VAMP4-202ENST00000367740 NMNAT2Q9BZQ4 307 aa11.33□□□□□ -0.6
VAMP4-202ENST00000367740 CHST6Q9GZX3 395 aa11.33□□□□□ -0.6
VAMP4-202ENST00000367740 EGLN3Q9H6Z9 239 aa11.33□□□□□ -0.6
VAMP4-202ENST00000367740 NIPAL2Q9H841 368 aa11.33□□□□□ -0.6
VAMP4-202ENST00000367740 UBE2J1Q9Y385 318 aaPredicted RBP11.33□□□□□ -0.6
VAMP4-202ENST00000367740 VPS13DQ5THJ4 4388 aa11.32□□□□□ -0.6
VAMP4-202ENST00000367740 A0A1W2PPI3 338 aa11.32□□□□□ -0.6
VAMP4-202ENST00000367740 F8VVB4 439 aa11.32□□□□□ -0.6
VAMP4-202ENST00000367740 F8VWA3 439 aa11.32□□□□□ -0.6
VAMP4-202ENST00000367740 IGHA1P01876 353 aa11.32□□□□□ -0.6
VAMP4-202ENST00000367740 RHCEP18577 417 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms