RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 ACAA1P09110 424 aaPredicted RBP12.09□□□□□ -0.47
SF3B5-201ENST00000367569 DUSP1P28562 367 aa12.09□□□□□ -0.47
SF3B5-201ENST00000367569 RBP2P50120 134 aa12.09□□□□□ -0.47
SF3B5-201ENST00000367569 ATP1B3P54709 279 aa12.09□□□□□ -0.47
SF3B5-201ENST00000367569 IL24Q13007 206 aa12.09□□□□□ -0.47
SF3B5-201ENST00000367569 KLRD1Q13241 179 aa12.09□□□□□ -0.47
SF3B5-201ENST00000367569 FAM185AQ8N0U4 392 aa12.09□□□□□ -0.47
SF3B5-201ENST00000367569 SIGLECL1Q8N7X8 197 aa12.09□□□□□ -0.47
SF3B5-201ENST00000367569 C3orf56Q8N813 242 aa12.09□□□□□ -0.47
SF3B5-201ENST00000367569 CCDC54Q8NEL0 328 aa12.09□□□□□ -0.47
SF3B5-201ENST00000367569 CNBD2Q96M20 576 aa12.09□□□□□ -0.47
SF3B5-201ENST00000367569 PKIBQ9C010 78 aa12.09□□□□□ -0.47
SF3B5-201ENST00000367569 ZCCHC4Q9H5U6 513 aa12.09□□□□□ -0.47
SF3B5-201ENST00000367569 CNOT2Q9NZN8 540 aaKnown RBP12.09□□□□□ -0.47
SF3B5-201ENST00000367569 IGKV1-12A0A0C4DH73 117 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 ZNF879B4DU55 563 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 TOX4O94842 621 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 IGKV1D-12P01611 117 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 PPIAL4GP0DN37 164 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 PRKACAP17612 351 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 ERVK11-1P61568 191 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 MRPL28Q13084 256 aaKnown RBP12.08□□□□□ -0.48
SF3B5-201ENST00000367569 MED21Q13503 144 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 ATPAF1Q5TC12 328 aaPredicted RBP12.08□□□□□ -0.48
SF3B5-201ENST00000367569 CD276Q5ZPR3 534 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 RPL22L1Q6P5R6 122 aaKnown RBP12.08□□□□□ -0.48
SF3B5-201ENST00000367569 CRIP3Q6Q6R5 217 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 LHFPL2Q6ZUX7 228 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 UTS2BQ765I0 119 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 VMO1Q7Z5L0 202 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 ASCC1Q8N9N2 400 aaKnown RBP12.08□□□□□ -0.48
SF3B5-201ENST00000367569 ZNF485Q8NCK3 441 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 OR4M1Q8NGD0 313 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 OR52N1Q8NH53 320 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 LHX4Q969G2 390 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 ITFG2Q969R8 447 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 UPRTQ96BW1 309 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 C10orf35Q96D05 121 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 SMIM19Q96E16 107 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 ZNF48Q96MX3 618 aaPredicted RBP12.08□□□□□ -0.48
SF3B5-201ENST00000367569 WDFY2Q96P53 400 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 MYCBPQ99417 103 aaPredicted RBP12.08□□□□□ -0.48
SF3B5-201ENST00000367569 DCTN5Q9BTE1 182 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 SIRPDQ9H106 197 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 HES4Q9HCC6 221 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 C19orf12Q9NSK7 152 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 FKBP14Q9NWM8 211 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 BABAM2Q9NXR7 383 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 NUP50Q9UKX7 468 aa12.08□□□□□ -0.48
SF3B5-201ENST00000367569 DSCAML1Q8TD84 2053 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 A0A1W2PPK0 400 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 MAGEA13PA6NCF6 341 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 SULT1B1O43704 296 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 MMP9P14780 707 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 PRKACBP22694 351 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 MYF6P23409 242 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 CPT2P23786 658 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 PRDX2P32119 198 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 UBA52P62987 128 aaKnown RBP12.07□□□□□ -0.48
SF3B5-201ENST00000367569 COL10A1Q03692 680 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 C6orf141Q5SZD1 244 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 METTL11BQ5VVY1 283 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 SATL1Q86VE3 508 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 EGFL6Q8IUX8 553 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 PNKDQ8N490 385 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 PNLDC1Q8NA58 520 aaKnown RBP12.07□□□□□ -0.48
SF3B5-201ENST00000367569 RPS4Y2Q8TD47 263 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 TMEM106AQ96A25 262 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 SPSB1Q96BD6 273 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 OR14A2Q96R54 314 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 FAM192AQ9GZU8 254 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 MS4A7Q9GZW8 240 aaPredicted RBP12.07□□□□□ -0.48
SF3B5-201ENST00000367569 VCX3BQ9H321 246 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 PLCXD1Q9NUJ7 323 aa12.07□□□□□ -0.48
SF3B5-201ENST00000367569 SIRPB1O00241 398 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 NOS1APO75052 506 aaPredicted RBP12.06□□□□□ -0.48
SF3B5-201ENST00000367569 MT-ND2P03891 347 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 CDK1P06493 297 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 FPR2P25090 351 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 WNT4P56705 351 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 EDDM3AQ14507 147 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 INSL4Q14641 139 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 TUSC1Q2TAM9 212 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 AWAT1Q58HT5 328 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 DMKNQ6E0U4 476 aaPredicted RBP12.06□□□□□ -0.48
SF3B5-201ENST00000367569 DNAAF1Q8NEP3 725 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 OR10K1Q8NGX5 313 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 GPR148Q8TDV2 347 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 GHSRQ92847 366 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 SDSLQ96GA7 329 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 MED30Q96HR3 178 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 PGLYRP3Q96LB9 341 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 OR5M11Q96RB7 305 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 ANKRD60Q9BZ19 345 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 CHST6Q9GZX3 395 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 DNTTIP1Q9H147 329 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 TNFRSF19Q9NS68 423 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 RASL12Q9NYN1 266 aa12.06□□□□□ -0.48
SF3B5-201ENST00000367569 PKD1L1Q8TDX9 2849 aa12.05□□□□□ -0.48
SF3B5-201ENST00000367569 H0YJX3 145 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms