RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 RNF182Q8N6D2 247 aa2.09□□□□□ -2.07
RNU6-28P-201ENST00000362378 LRRC52Q8N7C0 313 aa2.09□□□□□ -2.07
RNU6-28P-201ENST00000362378 SLC26A10Q8NG04 563 aa2.09□□□□□ -2.07
RNU6-28P-201ENST00000362378 TNFRSF14Q92956 283 aa2.09□□□□□ -2.07
RNU6-28P-201ENST00000362378 ZNF2Q9BSG1 426 aaPredicted RBP2.09□□□□□ -2.07
RNU6-28P-201ENST00000362378 TSGA10Q9BZW7 698 aa2.09□□□□□ -2.07
RNU6-28P-201ENST00000362378 ASB7Q9H672 318 aa2.09□□□□□ -2.07
RNU6-28P-201ENST00000362378 TMBIM4Q9HC24 238 aa2.09□□□□□ -2.07
RNU6-28P-201ENST00000362378 PARP11Q9NR21 331 aa2.09□□□□□ -2.07
RNU6-28P-201ENST00000362378 STX18Q9P2W9 335 aaKnown RBP2.09□□□□□ -2.07
RNU6-28P-201ENST00000362378 MARCOQ9UEW3 520 aaPredicted RBP2.09□□□□□ -2.07
RNU6-28P-201ENST00000362378 CEACAM18A8MTB9 384 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 C16orf90A8MZG2 172 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 UPK2O00526 184 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 DHRS3O75911 302 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 RLN2P04090 185 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 CELP19835 753 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 IL12BP29460 328 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 IDH2P48735 452 aaKnown RBP2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 KRTAP13-3Q3SY46 172 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 ZNF404Q494X3 552 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 DNLZQ5SXM8 178 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 C16orf47Q6ZP98 133 aaPredicted RBP2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 CYP4Z1Q86W10 505 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 TMEM25Q86YD3 366 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 DRAXINQ8NBI3 349 aaPredicted RBP2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 ZNF555Q8NEP9 628 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 UBA3Q8TBC4 463 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 DERL3Q96Q80 235 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 C1orf50Q9BV19 199 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 METTL8Q9H825 291 aaKnown RBP2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 RDH14Q9HBH5 336 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 TREM1Q9NP99 234 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 RBM22Q9NW64 420 aaKnown RBP eCLIP2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 DNAJC27Q9NZQ0 273 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 RWDD2AQ9UIY3 292 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 INSIG2Q9Y5U4 225 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 AK9Q5TCS8 1911 aa2.08□□□□□ -2.08
RNU6-28P-201ENST00000362378 LOC389332A0A1B0GUA5 103 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 LINC00854A0A1B0GVQ3 168 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 ZNF98A6NK75 572 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 IQCF5A8MTL0 148 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 C9JQL5 133 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 K7EM74 188 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 CDIPTO14735 213 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 OR2A4O95047 310 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 LDOC1O95751 146 aaPredicted RBP2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 IGHV1-46P01743 117 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 CDK1P06493 297 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 TEAD1P28347 426 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 GTF2H1P32780 548 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 MAGEA3P43357 314 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 TGM4P49221 684 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 XKP51811 444 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 XRCC4Q13426 336 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 ELOCQ15369 112 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 Q499Y3 187 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 KPRPQ5T749 579 aaPredicted RBP2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 TRMT10CQ7L0Y3 403 aaKnown RBP2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 ITPRIPQ8IWB1 547 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 LRRC8AQ8IWT6 810 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 SYCE1Q8N0S2 351 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 C17orf78Q8N4C9 275 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 ZNF561Q8N587 486 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 ACBD4Q8NC06 268 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 OR8G5Q8NG78 346 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 OR4K17Q8NGC6 315 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 BLNKQ8WV28 456 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 NELFBQ8WX92 580 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 OR5P2Q8WZ92 322 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 RMI2Q96E14 147 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 YIPF6Q96EC8 236 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 OR2A7Q96R45 310 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 ACBD6Q9BR61 282 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 ABCB9Q9NP78 766 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 OR2S2Q9NQN1 319 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 DIABLOQ9NR28 239 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 SDHAF3Q9NRP4 125 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 USH1CQ9Y6N9 552 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 USP42Q9H9J4 1324 aaKnown RBP2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 TMEM131Q92545 1883 aa2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 KIF26AQ9ULI4 1882 aaPredicted RBP2.07□□□□□ -2.08
RNU6-28P-201ENST00000362378 BRWD3Q6RI45 1802 aa2.06□□□□□ -2.08
RNU6-28P-201ENST00000362378 A0A1B0GXF2 115 aa2.06□□□□□ -2.08
RNU6-28P-201ENST00000362378 ZNF233A6NK53 670 aa2.06□□□□□ -2.08
RNU6-28P-201ENST00000362378 MFNGO00587 321 aa2.06□□□□□ -2.08
RNU6-28P-201ENST00000362378 SGCEO43556 437 aa2.06□□□□□ -2.08
RNU6-28P-201ENST00000362378 SLC37A4O43826 429 aa2.06□□□□□ -2.08
RNU6-28P-201ENST00000362378 SHOX2O60902 331 aaPredicted RBP2.06□□□□□ -2.08
RNU6-28P-201ENST00000362378 SEC11BP0C7V7 166 aa2.06□□□□□ -2.08
RNU6-28P-201ENST00000362378 RPA3P35244 121 aaPredicted RBP2.06□□□□□ -2.08
RNU6-28P-201ENST00000362378 GCLMP48507 274 aa2.06□□□□□ -2.08
RNU6-28P-201ENST00000362378 CD151P48509 253 aa2.06□□□□□ -2.08
RNU6-28P-201ENST00000362378 TTPAP49638 278 aa2.06□□□□□ -2.08
RNU6-28P-201ENST00000362378 UBE2KP61086 200 aa2.06□□□□□ -2.08
RNU6-28P-201ENST00000362378 CD164Q04900 197 aa2.06□□□□□ -2.08
RNU6-28P-201ENST00000362378 BAXQ07812 192 aa2.06□□□□□ -2.08
RNU6-28P-201ENST00000362378 ZBTB6Q15916 424 aa2.06□□□□□ -2.08
RNU6-28P-201ENST00000362378 SSX1Q16384 188 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms