RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 KCNK17Q96T54 332 aa16.67■□□□□ 0.26
CMTM3-201ENST00000361909 NXF5Q9H1B4 397 aaKnown RBP16.67■□□□□ 0.26
CMTM3-201ENST00000361909 NPIPA1Q9UND3 350 aa16.67■□□□□ 0.26
CMTM3-201ENST00000361909 C17orf105B2RV13 164 aa16.67■□□□□ 0.26
CMTM3-201ENST00000361909 CRTAPO75718 401 aaPredicted RBP16.67■□□□□ 0.26
CMTM3-201ENST00000361909 MBPP02686 304 aaPredicted RBP16.67■□□□□ 0.26
CMTM3-201ENST00000361909 UBE2KP61086 200 aa16.67■□□□□ 0.26
CMTM3-201ENST00000361909 SLC35E3Q7Z769 313 aa16.67■□□□□ 0.26
CMTM3-201ENST00000361909 AGBL5Q8NDL9 886 aa16.67■□□□□ 0.26
CMTM3-201ENST00000361909 MRPL24Q96A35 216 aaKnown RBP16.67■□□□□ 0.26
CMTM3-201ENST00000361909 MEGF10Q96KG7 1140 aa16.67■□□□□ 0.26
CMTM3-201ENST00000361909 ST6GALNAC5Q9BVH7 336 aa16.67■□□□□ 0.26
CMTM3-201ENST00000361909 MMP24Q9Y5R2 645 aa16.67■□□□□ 0.26
CMTM3-201ENST00000361909 FER1L5A0AVI2 2057 aa16.66■□□□□ 0.26
CMTM3-201ENST00000361909 ZNF726A6NNF4 738 aa16.66■□□□□ 0.26
CMTM3-201ENST00000361909 SDCBPO00560 298 aaPredicted RBP16.66■□□□□ 0.26
CMTM3-201ENST00000361909 HEXBP07686 556 aa16.66■□□□□ 0.26
CMTM3-201ENST00000361909 OR3A4PP47883 348 aa16.66■□□□□ 0.26
CMTM3-201ENST00000361909 ZNF266Q14584 549 aa16.66■□□□□ 0.26
CMTM3-201ENST00000361909 KHDC3LQ587J8 217 aa16.66■□□□□ 0.26
CMTM3-201ENST00000361909 POMZP3Q6PJE2 187 aa16.66■□□□□ 0.26
CMTM3-201ENST00000361909 FAM213BQ8TBF2 198 aa16.66■□□□□ 0.26
CMTM3-201ENST00000361909 TVP23CQ96ET8 276 aa16.66■□□□□ 0.26
CMTM3-201ENST00000361909 LURAP1Q96LR2 239 aa16.66■□□□□ 0.26
CMTM3-201ENST00000361909 WFDC1Q9HC57 220 aa16.66■□□□□ 0.26
CMTM3-201ENST00000361909 PPP1R14DQ9NXH3 145 aa16.66■□□□□ 0.26
CMTM3-201ENST00000361909 ASCC3Q8N3C0 2202 aaKnown RBP16.65■□□□□ 0.26
CMTM3-201ENST00000361909 NUDT14O95848 222 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 SCGB1D2O95969 90 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 HSPB1P04792 205 aaKnown RBP16.65■□□□□ 0.26
CMTM3-201ENST00000361909 CCL1P22362 96 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 IL12BP29460 328 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 APOBEC1P41238 236 aaKnown RBP16.65■□□□□ 0.26
CMTM3-201ENST00000361909 GAMTQ14353 236 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 NKAIN1Q4KMZ8 207 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 CDPF1Q6NVV7 123 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 SLC38A9Q8NBW4 561 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 APCDD1LQ8NCL9 501 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 SEMA6DQ8NFY4 1073 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 SSC4DQ8WTU2 575 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 ADOQ96SZ5 270 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 KLHDC3Q9BQ90 382 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 HIPK2Q9H2X6 1198 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 PNO1Q9NRX1 252 aaKnown RBP16.65■□□□□ 0.26
CMTM3-201ENST00000361909 DCAF16Q9NXF7 216 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 TTC28Q96AY4 2481 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 RALGAPA1Q6GYQ0 2036 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 NSG1A0A0A6YYJ2 146 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 TIAF1O95411 115 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 HCKP08631 526 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 PPP1CCP36873 323 aaKnown RBP16.65■□□□□ 0.26
CMTM3-201ENST00000361909 GLIPR1P48060 266 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 NSDHLQ15738 373 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 SPNS3Q6ZMD2 512 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 C9orf40Q8IXQ3 194 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 TSLPQ969D9 159 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 RAB24Q969Q5 203 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 SUCNR1Q9BXA5 334 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 VN1R1Q9GZP7 353 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 BANF2Q9H503 90 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 OCIAD1Q9NX40 245 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 VPS13AQ96RL7 3174 aa16.65■□□□□ 0.26
CMTM3-201ENST00000361909 FTCDNL1E5RQL4 147 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 CDX4O14627 284 aaPredicted RBP16.64■□□□□ 0.25
CMTM3-201ENST00000361909 HSD17B6O14756 317 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 SERPINA2P20848 420 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 FHITP49789 147 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 ZNF385CQ66K41 422 aaPredicted RBP16.64■□□□□ 0.25
CMTM3-201ENST00000361909 OR51T1Q8NGJ9 327 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 DAZLQ92904 295 aaKnown RBP16.64■□□□□ 0.25
CMTM3-201ENST00000361909 NOL4LQ96MY1 436 aaPredicted RBP16.64■□□□□ 0.25
CMTM3-201ENST00000361909 NIPSNAP3BQ9BS92 247 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 TM2D1Q9BX74 207 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 PECRQ9BY49 303 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 PADI1Q9ULC6 663 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 ZDHHC8Q9ULC8 765 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 RAMP1O60894 148 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 IGKV3-11P04433 115 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 HPNP05981 417 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 SOD3P08294 240 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 SRP19P09132 144 aaKnown RBP16.64■□□□□ 0.25
CMTM3-201ENST00000361909 CXCL1P09341 107 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 DUSP1P28562 367 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 OR10G4Q8NGN3 311 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 GPER1Q99527 375 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 TBL1XR1Q9BZK7 514 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 TMEM242Q9NWH2 141 aa16.64■□□□□ 0.25
CMTM3-201ENST00000361909 ZNF878C9JN71 531 aa16.63■□□□□ 0.25
CMTM3-201ENST00000361909 CD59P13987 128 aa16.63■□□□□ 0.25
CMTM3-201ENST00000361909 FMODQ06828 376 aa16.63■□□□□ 0.25
CMTM3-201ENST00000361909 LCN10Q6JVE6 187 aa16.63■□□□□ 0.25
CMTM3-201ENST00000361909 CLEC9AQ6UXN8 241 aa16.63■□□□□ 0.25
CMTM3-201ENST00000361909 TMEM182Q6ZP80 229 aaPredicted RBP16.63■□□□□ 0.25
CMTM3-201ENST00000361909 C1orf87Q8N0U7 546 aa16.63■□□□□ 0.25
CMTM3-201ENST00000361909 OR51E1Q8TCB6 317 aa16.63■□□□□ 0.25
CMTM3-201ENST00000361909 RCC1LQ96I51 464 aaKnown RBP16.63■□□□□ 0.25
CMTM3-201ENST00000361909 ZNF2Q9BSG1 426 aaPredicted RBP16.63■□□□□ 0.25
CMTM3-201ENST00000361909 GPR61Q9BZJ8 451 aa16.63■□□□□ 0.25
CMTM3-201ENST00000361909 SH3BGRL3Q9H299 93 aa16.63■□□□□ 0.25
CMTM3-201ENST00000361909 NAA60Q9H7X0 242 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms