RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 ABCA3Q99758 1704 aa17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 HSPB2A8KAH6 182 aa17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 TFAP2AP05549 437 aa17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 HSPB2Q16082 182 aa17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 SIGLEC7Q9Y286 467 aa17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 COL11A1P12107 1806 aaPredicted RBP17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 FOCADQ5VW36 1801 aa17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 COX5AP20674 150 aa17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 SKP2Q13309 424 aa17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 LY6EQ16553 131 aa17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 DRAXINQ8NBI3 349 aaPredicted RBP17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 CIB3Q96Q77 187 aaPredicted RBP17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 RALYQ9UKM9 306 aaKnown RBP17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 HRASP01112 189 aa17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 SFTPCP11686 197 aa17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 SEBOXQ9HB31 216 aaPredicted RBP17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 E5RGE8 158 aa17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 SLC51BQ86UW2 128 aa17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 MDP1Q86V88 176 aa17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 NSG2Q9Y328 171 aa17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 FAM3AP98173 230 aa17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 TUSC1Q2TAM9 212 aa17.95■□□□□ 0.46
CDC42BPB-201ENST00000361246 LTBP4Q8N2S1 1624 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 SPP1P10451 314 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 PSMB6P28072 239 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 Q8IYB0 196 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 OR52L2PQ8NGH6 319 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 A0A1W2PQF6 199 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 PRR19A6NJB7 356 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 WNT3P56703 355 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 ZNF574Q6ZN55 896 aaPredicted RBP17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 ZNF716A6NP11 495 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 HAND1O96004 215 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 NAT2P11245 290 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 GUCA2BQ16661 112 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 UBR3Q6ZT12 1888 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 SNRPCP09234 159 aaKnown RBP17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 ZNF239Q16600 458 aaKnown RBP17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 D2HGDHQ8N465 521 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 CNTD2Q9H8S5 307 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 SCPEP1Q9HB40 452 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 RYDENQ9NUL5 291 aaKnown RBP17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 EPXP11678 715 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 GVQW1Q8N7I0 195 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 OR51I2Q9H344 312 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 NINQ8N4C6 2090 aa17.94■□□□□ 0.46
CDC42BPB-201ENST00000361246 BRWD3Q6RI45 1802 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 CNN1P51911 297 aaKnown RBP17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 C1orf53Q5VUE5 145 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 INSIG2Q9Y5U4 225 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 ACTL6AO96019 429 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 BRS3P32247 399 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 PP6455Q8WZ26 134 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 IGHV3-72A0A0B4J1Y9 119 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 IGHV4-34P06331 123 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 FABP9Q0Z7S8 132 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 ZIC1Q15915 447 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 ZNFX1Q9P2E3 1918 aaKnown RBP17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 SCO1O75880 301 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 CD96P40200 585 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 GAB4Q2WGN9 574 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 CMPK2Q5EBM0 449 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 PECRQ9BY49 303 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 NUP214P35658 2090 aaPredicted RBP17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 DDOSTP39656 456 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 FGF8P55075 233 aaPredicted RBP17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 SLC25A30Q5SVS4 291 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 LYG2Q86SG7 212 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 LILRB1Q8NHL6 650 aaPredicted RBP17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 LAMP3Q9UQV4 416 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 G0S2P27469 103 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 OR5R1Q8NH85 324 aa17.93■□□□□ 0.46
CDC42BPB-201ENST00000361246 HMGN3Q15651 99 aa17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 FOXJ3Q9UPW0 622 aa17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 G3V3Q6 166 aa17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 HOXC4P09017 264 aaPredicted RBP17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 AESQ08117 197 aa17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 TSPO2Q5TGU0 170 aa17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 RIMKLAQ8IXN7 391 aa17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 SMIM7Q9BQ49 75 aa17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 NXF2Q9GZY0 626 aaKnown RBP17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 GABARAPL1Q9H0R8 117 aa17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 RAC3P60763 192 aa17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 FHL5Q5TD97 284 aa17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 C2orf50Q96LR7 162 aa17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 SIRT3Q9NTG7 399 aaPredicted RBP17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 LOC102723971A0A1B0GUV8 181 aa17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 ASPDHA6ND91 283 aa17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 IL11P20809 199 aa17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 PLAURQ03405 335 aa17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 ZNF425Q6IV72 752 aa17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 SYS1Q8N2H4 156 aa17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 GRAMD2BQ96HH9 432 aa17.92■□□□□ 0.46
CDC42BPB-201ENST00000361246 ACAA2P42765 397 aaKnown RBP17.91■□□□□ 0.46
CDC42BPB-201ENST00000361246 ZNF528Q3MIS6 628 aa17.91■□□□□ 0.46
CDC42BPB-201ENST00000361246 ETV3LQ6ZN32 361 aa17.91■□□□□ 0.46
CDC42BPB-201ENST00000361246 KCNE1BA0A087WTH5 132 aa17.91■□□□□ 0.46
CDC42BPB-201ENST00000361246 PPP5D1E7EU14 171 aa17.91■□□□□ 0.46
CDC42BPB-201ENST00000361246 CCL19Q99731 98 aa17.91■□□□□ 0.46
CDC42BPB-201ENST00000361246 SIRT5Q9NXA8 310 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms