RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 R4GMQ9 66 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 MASP2O00187 686 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 UBE2V2Q15819 145 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 ARIH2OSQ8N7S6 290 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 GSTZ1O43708 216 aaPredicted RBP11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 AKR7A3O95154 331 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 RAG2P55895 527 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 NUBPLQ8TB37 319 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 UBTD1Q9HAC8 227 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 LIPGQ9Y5X9 500 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 USP54Q70EL1 1684 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 C9orf170A2RU37 121 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 OR5B21A6NL26 309 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 CA2P00918 260 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 PRSS36Q5K4E3 855 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 TMEM108Q6UXF1 575 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 OSR2Q8N2R0 312 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 MZB1Q8WU39 189 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 RDH5Q92781 318 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 SPSB1Q96BD6 273 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 CES1P1Q9UKY3 287 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 AMDHD2Q9Y303 409 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 HMGN4O00479 90 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 SLC16A11Q8NCK7 471 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 RGPD4Q7Z3J3 1758 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 ID1P41134 155 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 ELFN2Q5R3F8 820 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 NSUN5P2Q63ZY6 315 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 SIRT6Q8N6T7 355 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 CLDN23Q96B33 292 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 PXNP49023 591 aaPredicted RBP11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 DIO1P49895 249 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 RIMKLAQ8IXN7 391 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 STXBP6Q8NFX7 210 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 SHISA4Q96DD7 197 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 TRMT61AQ96FX7 289 aaKnown RBP11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 FAM53BQ14153 422 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 ZNF385CQ66K41 422 aaPredicted RBP11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 TTC9BQ8N6N2 239 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 EMC6Q9BV81 110 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 OR2J1Q9GZK6 312 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 TXNIPQ9H3M7 391 aa11.86□□□□□ -0.51
SRGAP3-201ENST00000360413 GHRHP01286 108 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 SH2D2AQ9NP31 389 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 PPT2Q9UMR5 302 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 ST3GAL6Q9Y274 331 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 IFITM10A6NMD0 228 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 CSNK1EP49674 416 aaKnown RBP11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 ZNF141Q15928 474 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 BSXQ3C1V8 233 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 SP6Q3SY56 376 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 METRNLQ641Q3 311 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 HSF4Q9ULV5 492 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 DUSP8Q13202 625 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 PPP1R1AQ13522 171 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 Q5PR19 223 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 OR8A1Q8NGG7 326 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 ST6GAL2Q96JF0 529 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 SLC25A33Q9BSK2 321 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 FGF20Q9NP95 211 aaPredicted RBP11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 IL36GQ9NZH8 169 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 PPP1CCP36873 323 aaKnown RBP11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 EMP1P54849 157 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 ADAM20O43506 726 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 STAG3L3P0CL85 134 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 HOXD9P28356 352 aaPredicted RBP11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 ELSPBP1Q96BH3 223 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 TEX101Q9BY14 249 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 SLC25A19Q9HC21 320 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 PRSS50Q9UI38 385 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 TRAV17A0A0B4J275 112 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 C1SP09871 688 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 CCR5P51681 352 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 COL16A1Q07092 1604 aaPredicted RBP11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 C7orf77A4D0Y5 90 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 RBP4P02753 201 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 HAAOP46952 286 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 XKR7Q5GH72 579 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 MRAP2Q96G30 205 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 KCNMB2Q9Y691 235 aa11.85□□□□□ -0.51
SRGAP3-201ENST00000360413 GNG3P63215 75 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 SLC38A11Q08AI6 406 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 NUDT8Q8WV74 236 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 MBD3L1Q8WWY6 194 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 SMIM14Q96QK8 99 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 MRPL37Q9BZE1 423 aaKnown RBP11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 PBOV1Q9GZY1 135 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 TMEM167BQ9NRX6 74 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 C20orf141Q9NUB4 165 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 TMEM265A0A087WTH1 108 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 hADV38S2A0JD32 116 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 RIGQ13278 110 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 ZNF77Q15935 545 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 SPNS3Q6ZMD2 512 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 VN1R1Q9GZP7 353 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 TRGV8A0A0C4DH27 118 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 LINC00862A6NCI5 91 aa11.84□□□□□ -0.51
SRGAP3-201ENST00000360413 SPATA45Q537H7 98 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms