RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 ZNF808Q8N4W9 903 aaPredicted RBP11.53□□□□□ -0.56
CCDC197-201ENST00000359253 OR10K1Q8NGX5 313 aa11.53□□□□□ -0.56
CCDC197-201ENST00000359253 CCDC120Q96HB5 630 aa11.53□□□□□ -0.56
CCDC197-201ENST00000359253 MED30Q96HR3 178 aa11.53□□□□□ -0.56
CCDC197-201ENST00000359253 ARHGAP5-AS1Q96IT6 56 aa11.53□□□□□ -0.56
CCDC197-201ENST00000359253 SLC25A21Q9BQT8 299 aaPredicted RBP11.53□□□□□ -0.56
CCDC197-201ENST00000359253 MCUBQ9NWR8 336 aa11.53□□□□□ -0.56
CCDC197-201ENST00000359253 COQ3Q9NZJ6 369 aa11.53□□□□□ -0.56
CCDC197-201ENST00000359253 SCP2D1Q9UJQ7 156 aa11.53□□□□□ -0.56
CCDC197-201ENST00000359253 ST3GAL6Q9Y274 331 aa11.53□□□□□ -0.56
CCDC197-201ENST00000359253 VSTM5A8MXK1 200 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 TIMM8AO60220 97 aaPredicted RBP11.52□□□□□ -0.57
CCDC197-201ENST00000359253 PDCD6O75340 191 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 NDUFB6O95139 128 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 RAB3DO95716 219 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 IGHV3-13P01766 116 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 FUT3P21217 361 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 DTYMKP23919 212 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 CHRNB4P30926 498 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 MECP2P51608 486 aaKnown RBP11.52□□□□□ -0.57
CCDC197-201ENST00000359253 RBM11P57052 281 aaKnown RBP11.52□□□□□ -0.57
CCDC197-201ENST00000359253 RAB25P57735 213 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 NKX6-1P78426 367 aaPredicted RBP11.52□□□□□ -0.57
CCDC197-201ENST00000359253 MRPS15P82914 257 aaKnown RBP11.52□□□□□ -0.57
CCDC197-201ENST00000359253 IL13RA2Q14627 380 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 RBMS2Q15434 407 aaKnown RBP11.52□□□□□ -0.57
CCDC197-201ENST00000359253 TATDN3Q17R31 274 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 DMRTC1Q5HYR2 192 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 MYO7BQ6PIF6 2116 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 ZNF782Q6ZMW2 699 aaPredicted RBP11.52□□□□□ -0.57
CCDC197-201ENST00000359253 BHLHE23Q8NDY6 225 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 NUP37Q8NFH4 326 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 OR4C16Q8NGL9 310 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 UPRTQ96BW1 309 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 PRRT1Q99946 306 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 NEURL2Q9BR09 285 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 ADAT1Q9BUB4 502 aaKnown RBP11.52□□□□□ -0.57
CCDC197-201ENST00000359253 CXXC4Q9H2H0 198 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 ZMAT3Q9HA38 289 aaKnown RBP11.52□□□□□ -0.57
CCDC197-201ENST00000359253 SLC2A8Q9NY64 477 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 SH3BGRL2Q9UJC5 107 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 HIVEP3Q5T1R4 2406 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 RTTNQ86VV8 2226 aa11.52□□□□□ -0.57
CCDC197-201ENST00000359253 NOS1APO75052 506 aaPredicted RBP11.51□□□□□ -0.57
CCDC197-201ENST00000359253 PEX14O75381 377 aa11.51□□□□□ -0.57
CCDC197-201ENST00000359253 PLATP00750 562 aa11.51□□□□□ -0.57
CCDC197-201ENST00000359253 CD3DP04234 171 aa11.51□□□□□ -0.57
CCDC197-201ENST00000359253 SFTPBP07988 381 aa11.51□□□□□ -0.57
CCDC197-201ENST00000359253 GABRR1P24046 479 aa11.51□□□□□ -0.57
CCDC197-201ENST00000359253 CD40P25942 277 aa11.51□□□□□ -0.57
CCDC197-201ENST00000359253 CHATP28329 748 aa11.51□□□□□ -0.57
CCDC197-201ENST00000359253 MPV17P39210 176 aa11.51□□□□□ -0.57
CCDC197-201ENST00000359253 TAS2R46P59540 309 aa11.51□□□□□ -0.57
CCDC197-201ENST00000359253 RNASE10Q5GAN6 216 aaKnown RBP11.51□□□□□ -0.57
CCDC197-201ENST00000359253 HAGHLQ6PII5 290 aaPredicted RBP11.51□□□□□ -0.57
CCDC197-201ENST00000359253 HOGA1Q86XE5 327 aa11.51□□□□□ -0.57
CCDC197-201ENST00000359253 FBXL14Q8N1E6 418 aa11.51□□□□□ -0.57
CCDC197-201ENST00000359253 LILRB4Q8NHJ6 448 aa11.51□□□□□ -0.57
CCDC197-201ENST00000359253 FGF23Q9GZV9 251 aaPredicted RBP11.51□□□□□ -0.57
CCDC197-201ENST00000359253 IFT22Q9H7X7 185 aa11.51□□□□□ -0.57
CCDC197-201ENST00000359253 NPDC1Q9NQX5 325 aaPredicted RBP11.51□□□□□ -0.57
CCDC197-201ENST00000359253 NUDT15Q9NV35 164 aa11.51□□□□□ -0.57
CCDC197-201ENST00000359253 KCNK7Q9Y2U2 307 aa11.51□□□□□ -0.57
CCDC197-201ENST00000359253 C7orf66A4D0T2 115 aa11.5□□□□□ -0.57
CCDC197-201ENST00000359253 SSX5O60225 188 aa11.5□□□□□ -0.57
CCDC197-201ENST00000359253 IL5P05113 134 aa11.5□□□□□ -0.57
CCDC197-201ENST00000359253 CCR6P51684 374 aa11.5□□□□□ -0.57
CCDC197-201ENST00000359253 ERVS71-1P61550 626 aa11.5□□□□□ -0.57
CCDC197-201ENST00000359253 ADORA2A-AS1P86434 159 aa11.5□□□□□ -0.57
CCDC197-201ENST00000359253 TAF9Q16594 264 aa11.5□□□□□ -0.57
CCDC197-201ENST00000359253 SRSF7Q16629 238 aaKnown RBP eCLIP11.5□□□□□ -0.57
CCDC197-201ENST00000359253 TMEM255AQ5JRV8 349 aa11.5□□□□□ -0.57
CCDC197-201ENST00000359253 VAX1Q5SQQ9 334 aa11.5□□□□□ -0.57
CCDC197-201ENST00000359253 SFRP4Q6FHJ7 346 aaPredicted RBP11.5□□□□□ -0.57
CCDC197-201ENST00000359253 FIP1L1Q6UN15 594 aaKnown RBP11.5□□□□□ -0.57
CCDC197-201ENST00000359253 AKAP14Q86UN6 197 aa11.5□□□□□ -0.57
CCDC197-201ENST00000359253 ARRDC1Q8N5I2 433 aa11.5□□□□□ -0.57
CCDC197-201ENST00000359253 NUDCD2Q8WVJ2 157 aa11.5□□□□□ -0.57
CCDC197-201ENST00000359253 ITLN2Q8WWU7 325 aaPredicted RBP11.5□□□□□ -0.57
CCDC197-201ENST00000359253 GTF3AQ92664 365 aaKnown RBP11.5□□□□□ -0.57
CCDC197-201ENST00000359253 RADILQ96JH8 1075 aa11.5□□□□□ -0.57
CCDC197-201ENST00000359253 ALX4Q9H161 411 aaPredicted RBP11.5□□□□□ -0.57
CCDC197-201ENST00000359253 TLNRD1Q9H1K6 362 aa11.5□□□□□ -0.57
CCDC197-201ENST00000359253 C20orf85Q9H1P6 137 aa11.5□□□□□ -0.57
CCDC197-201ENST00000359253 RIMS4Q9H426 269 aaPredicted RBP11.5□□□□□ -0.57
CCDC197-201ENST00000359253 MTCH1Q9NZJ7 389 aa11.5□□□□□ -0.57
CCDC197-201ENST00000359253 CRIM1Q9NZV1 1036 aa11.5□□□□□ -0.57
CCDC197-201ENST00000359253 KLF2Q9Y5W3 355 aaPredicted RBP11.5□□□□□ -0.57
CCDC197-201ENST00000359253 GCN1Q92616 2671 aaKnown RBP11.49□□□□□ -0.57
CCDC197-201ENST00000359253 FLNCQ14315 2725 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 IGLV3-9A0A075B6K5 115 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 GEMIN2O14893 280 aaKnown RBP11.49□□□□□ -0.57
CCDC197-201ENST00000359253 ZG16O60844 167 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 LILRA1O75019 489 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 IFNA6P05013 189 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 HNRNPCP07910 306 aaKnown RBP eCLIP11.49□□□□□ -0.57
CCDC197-201ENST00000359253 BCL3P20749 454 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 CCKARP32238 428 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 FABP6P51161 128 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 KLF3P57682 345 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms