RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 CLPPQ16740 277 aaPredicted RBP9.75□□□□□ -0.85
SSU72-202ENST00000359060 VAX1Q5SQQ9 334 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 H3F3CQ6NXT2 135 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 GCNT2Q8N0V5 402 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 SVBPQ8N300 66 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 TMEM217Q8N7C4 229 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 BVESQ8NE79 360 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 RRNAD1Q96FB5 475 aaKnown RBP9.75□□□□□ -0.85
SSU72-202ENST00000359060 OBP2BQ9NPH6 170 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 NBASA2RRP1 2371 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 MFNGO00587 321 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 LDLRAD4O15165 306 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 PDCD6O75340 191 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 SRSF10O75494 262 aaKnown RBP9.75□□□□□ -0.85
SSU72-202ENST00000359060 PRDX4Q13162 271 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 C10orf128Q5T292 105 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 CDCP2Q5VXM1 449 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 GGNBP1Q5YKI7 109 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 BPIFCQ8NFQ6 507 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 OR2M7Q8NG81 312 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 MAGT1Q9H0U3 335 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 RGCCQ9H4X1 137 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 ZFP57Q9NU63 452 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 ACACAQ13085 2346 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 TRAV14DV4A0A0A6YYC5 116 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 A0A0A6YYD4 124 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 PMS2P1A4D2B8 440 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 DHRS7CA6NNS2 312 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 ST8SIA3O43173 380 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 GRPP07492 148 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 MELTFP08582 738 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 MEOX1P50221 254 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 RPL7L1Q6DKI1 246 aaKnown RBP9.75□□□□□ -0.85
SSU72-202ENST00000359060 OR2T2Q6IF00 324 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 PRSS54Q6PEW0 395 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 TIPARPQ7Z3E1 657 aaKnown RBP9.75□□□□□ -0.85
SSU72-202ENST00000359060 DPPA2Q7Z7J5 298 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 DNTTIP1Q9H147 329 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 TRAPPC2LQ9UL33 140 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 TMEM131Q92545 1883 aa9.75□□□□□ -0.85
SSU72-202ENST00000359060 ASCL1P50553 236 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 RAB2AP61019 212 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 ANKRD55Q3KP44 614 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 DCAF10Q5QP82 559 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 HES3Q5TGS1 186 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 TMEM65Q6PI78 240 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 MRPL24Q96A35 216 aaKnown RBP9.74□□□□□ -0.85
SSU72-202ENST00000359060 LYZL4Q96KX0 146 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 OCSTAMPQ9BR26 566 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 SLC2A8Q9NY64 477 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 OR5AC2Q9NZP5 309 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 DNPH1O43598 174 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 CD80P33681 288 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 TAGLNQ01995 201 aaKnown RBP9.74□□□□□ -0.85
SSU72-202ENST00000359060 ZNF239Q16600 458 aaKnown RBP9.74□□□□□ -0.85
SSU72-202ENST00000359060 RGS7BPQ6MZT1 257 aaPredicted RBP9.74□□□□□ -0.85
SSU72-202ENST00000359060 FIP1L1Q6UN15 594 aaKnown RBP9.74□□□□□ -0.85
SSU72-202ENST00000359060 BEND4Q6ZU67 534 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.74□□□□□ -0.85
SSU72-202ENST00000359060 BMPERQ8N8U9 685 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 TMEM54Q969K7 222 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 APOBEC3DQ96AK3 386 aaPredicted RBP9.74□□□□□ -0.85
SSU72-202ENST00000359060 SULT4A1Q9BR01 284 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 ZNF175Q9Y473 711 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 PCNX2A6NKB5 2137 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 CELA3AP09093 270 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 HOXD11P31277 338 aaPredicted RBP9.74□□□□□ -0.85
SSU72-202ENST00000359060 ZFP36L1Q07352 338 aaKnown RBP9.74□□□□□ -0.85
SSU72-202ENST00000359060 PDZK1IP1Q13113 114 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 TMEM178AQ8NBL3 297 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 NINJ1Q92982 152 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 ZNF629Q9UEG4 869 aaPredicted RBP9.74□□□□□ -0.85
SSU72-202ENST00000359060 MPTX1A8MV57 137 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 NXPH2O95156 264 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 HNF4GQ14541 408 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 SLC23A3Q6PIS1 610 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 FAM213BQ8TBF2 198 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 OR10C1Q96KK4 312 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 PRRX2Q99811 253 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 NKX6-2Q9C056 277 aaPredicted RBP9.74□□□□□ -0.85
SSU72-202ENST00000359060 FAM212BQ9NTI7 297 aaPredicted RBP9.74□□□□□ -0.85
SSU72-202ENST00000359060 RASL12Q9NYN1 266 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 IL17BQ9UHF5 180 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 KIAA2026Q5HYC2 2103 aa9.74□□□□□ -0.85
SSU72-202ENST00000359060 SHOXO15266 292 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 NME2P1O60361 137 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 SLC25A4P12235 298 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 KCNMB1Q16558 191 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 Q6ZRG5 221 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 HSD17B13Q7Z5P4 300 aaPredicted RBP9.73□□□□□ -0.85
SSU72-202ENST00000359060 TMEM123Q8N131 208 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 NMES1Q9C002 83 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 TMEM9BQ9NQ34 198 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 MED19A0JLT2 244 aaPredicted RBP9.73□□□□□ -0.85
SSU72-202ENST00000359060 SLC22A20A6NK97 555 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 MPGP29372 298 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 ARR3P36575 388 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 SPEM2Q0P670 501 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 TMEM105Q8N8V8 129 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 C10orf35Q96D05 121 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms