RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 IFITM5A6NNB3 132 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 NOTOA8MTQ0 251 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 VWC2LB2RUY7 222 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 NR4A2P43354 598 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 MICBQ29980 383 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 SLC22A6Q4U2R8 563 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 TEX36Q5VZQ5 186 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 ACP7Q6ZNF0 438 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 USP43Q70EL4 1123 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 LRRC28Q86X40 367 aaPredicted RBP12.45□□□□□ -0.42
CCNE1-202ENST00000357943 FAM90A1Q86YD7 464 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 OR5T2Q8NGG2 359 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 OR6M1Q8NGM8 313 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 DYNC2LI1Q8TCX1 351 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 EMG1Q92979 244 aaKnown RBP12.45□□□□□ -0.42
CCNE1-202ENST00000357943 TIMD4Q96H15 378 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 Q96MF0 132 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 S100A13Q99584 98 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 METTL9Q9H1A3 318 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 NARFLQ9H6Q4 476 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 IL36RNQ9UBH0 155 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 DNAJB11Q9UBS4 358 aa12.45□□□□□ -0.42
CCNE1-202ENST00000357943 AIPO00170 330 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 LGALS8O00214 317 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 IL1AP01583 271 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 TFF1P04155 84 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 SLC2A2P11168 524 aaPredicted RBP12.44□□□□□ -0.42
CCNE1-202ENST00000357943 SERPINA2P20848 420 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 P2RY14Q15391 338 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 RSU1Q15404 277 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 ZNF404Q494X3 552 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 SFXN4Q6P4A7 337 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 Q8IYB0 196 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 TBC1D15Q8TC07 691 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 DCSTAMPQ9H295 470 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 KCNK15Q9H427 330 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 RASL12Q9NYN1 266 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 NLKQ9UBE8 527 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 STEAP1Q9UHE8 339 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 TEX15Q9BXT5 2789 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 A0A0B4J203 849 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 TRAV38-1A0A0B4J264 116 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 HTR3BO95264 441 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 GYPAP02724 150 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 PRKACAP17612 351 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 CFPP27918 469 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 MDH2P40926 338 aaKnown RBP12.44□□□□□ -0.42
CCNE1-202ENST00000357943 SNU13P55769 128 aaKnown RBP12.44□□□□□ -0.42
CCNE1-202ENST00000357943 RAB11BQ15907 218 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 DGUOKQ16854 277 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 SMIM21Q3B7S5 101 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 OR10K2Q6IF99 312 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 FAM58AQ8N1B3 248 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 TMEM104Q8NE00 496 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 OR51D1Q8NGF3 324 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 TMEM246Q9BRR3 403 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 LIN7BQ9HAP6 207 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 HMG20AQ9NP66 347 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 IL36GQ9NZH8 169 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 DAPK2Q9UIK4 370 aa12.44□□□□□ -0.42
CCNE1-202ENST00000357943 IGHV4-61A0A0C4DH41 118 aa12.43□□□□□ -0.42
CCNE1-202ENST00000357943 OR2AT4A6NND4 320 aa12.43□□□□□ -0.42
CCNE1-202ENST00000357943 ZNF780AO75290 641 aaPredicted RBP12.43□□□□□ -0.42
CCNE1-202ENST00000357943 FSTL3O95633 263 aa12.43□□□□□ -0.42
CCNE1-202ENST00000357943 CSTBP04080 98 aaKnown RBP12.43□□□□□ -0.42
CCNE1-202ENST00000357943 PSG2P11465 335 aa12.43□□□□□ -0.42
CCNE1-202ENST00000357943 ARSBP15848 533 aa12.43□□□□□ -0.42
CCNE1-202ENST00000357943 MUC1P15941 1255 aaPredicted RBP12.43□□□□□ -0.42
CCNE1-202ENST00000357943 AMY2BP19961 511 aa12.43□□□□□ -0.42
CCNE1-202ENST00000357943 FGF12P61328 243 aa12.43□□□□□ -0.42
CCNE1-202ENST00000357943 STUMQ69YW2 141 aa12.43□□□□□ -0.42
CCNE1-202ENST00000357943 ELP2Q6IA86 826 aa12.43□□□□□ -0.42
CCNE1-202ENST00000357943 Q8NFD4 153 aa12.43□□□□□ -0.42
CCNE1-202ENST00000357943 SLC25A46Q96AG3 418 aa12.43□□□□□ -0.42
CCNE1-202ENST00000357943 GAL3ST1Q99999 423 aa12.43□□□□□ -0.42
CCNE1-202ENST00000357943 GHRLQ9UBU3 117 aa12.43□□□□□ -0.42
CCNE1-202ENST00000357943 IGKV1D-17A0A075B6S4 117 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 RFPL4AA6NLU0 287 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 CEACAM18A8MTB9 384 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 RFPL4AL1F8VTS6 287 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 VSIG8P0DPA2 414 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 SLC25A16P16260 332 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 DUSP1P28562 367 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 CEBPDP49716 269 aaPredicted RBP12.42□□□□□ -0.42
CCNE1-202ENST00000357943 QRFPP83859 136 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 PIGYQ3MUY2 71 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 TMEM155Q4W5P6 130 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 METAP1DQ6UB28 335 aaPredicted RBP12.42□□□□□ -0.42
CCNE1-202ENST00000357943 LYPD2Q6UXB3 125 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 OSR2Q8N2R0 312 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 ANGPTL6Q8NI99 470 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 FAM46BQ96A09 425 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 FAM3DQ96BQ1 224 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 BARHL1Q9BZE3 327 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 BANF2Q9H503 90 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 RHOFQ9HBH0 211 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 ETAA1Q9NY74 926 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 OR14J1Q9UGF5 321 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 MYO9AB2RTY4 2548 aa12.42□□□□□ -0.42
CCNE1-202ENST00000357943 A0A096LNT2 108 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms