RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 KLK11Q9UBX7 282 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 MTFP1Q9UDX5 166 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 NAGKQ9UJ70 344 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 ASB1Q9Y576 335 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 WSB1Q9Y6I7 421 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 IGHV1OR21-1A0A087WYE8 117 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 A0A1B0GTQ1 180 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 IGSF23A1L1A6 192 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 C21orf140B9A014 251 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 GSTZ1O43708 216 aaPredicted RBP5.75□□□□□ -1.49
UPF2-201ENST00000356352 FAM87AP0C7U9 286 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 P2RY1P47900 373 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 RIGQ13278 110 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 FZD5Q13467 585 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 ZBTB37Q5TC79 503 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 ZNF774Q6NX45 483 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 TOMM20LQ6UXN7 152 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 TMEM116Q8NCL8 245 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 NFAM1Q8NET5 270 aaPredicted RBP5.75□□□□□ -1.49
UPF2-201ENST00000356352 OR10G4Q8NGN3 311 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 OR10G9Q8NGN4 311 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 OR10G7Q8NGN6 311 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 SLC35B3Q9H1N7 401 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 ZNF275Q9NSD4 429 aaPredicted RBP5.75□□□□□ -1.49
UPF2-201ENST00000356352 ING1Q9UK53 422 aaPredicted RBP5.75□□□□□ -1.49
UPF2-201ENST00000356352 MMP24Q9Y5R2 645 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 MYH9P35579 1960 aaKnown RBP5.75□□□□□ -1.49
UPF2-201ENST00000356352 C9orf170A2RU37 121 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 TMEM210A6NLX4 147 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 H3BP45 60 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 PLPP3O14495 311 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 CDK2AP1O14519 115 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 RGS13O14921 159 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 SEMA7AO75326 666 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 SEMG1P04279 462 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 CTSDP07339 412 aaPredicted RBP5.75□□□□□ -1.49
UPF2-201ENST00000356352 HIST1H1EP10412 219 aaKnown RBP5.75□□□□□ -1.49
UPF2-201ENST00000356352 HLA-GP17693 338 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 GUCA2AQ02747 115 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 SKP2Q13309 424 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 TRIP6Q15654 476 aaKnown RBP5.75□□□□□ -1.49
UPF2-201ENST00000356352 TNXAQ16473 311 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 MRM1Q6IN84 353 aaKnown RBP5.75□□□□□ -1.49
UPF2-201ENST00000356352 PRSS54Q6PEW0 395 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 ZNF66Q6ZN08 573 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 ZBTB44Q8NCP5 570 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 OR5C1Q8NGR4 320 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 ZNF426Q9BUY5 554 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 Q9N2K0 584 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 COA4Q9NYJ1 87 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 NAT8Q9UHE5 227 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 MBD1Q9UIS9 605 aaPredicted RBP5.75□□□□□ -1.49
UPF2-201ENST00000356352 IGLV3-16A0A075B6K0 115 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 TRDCB7Z8K6 153 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 FCN1O00602 326 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 CST2P09228 141 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 COX7A1P24310 79 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 NXPH1P58417 271 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 PAFAH1B2P68402 229 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 SPEM2Q0P670 501 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 HYAL1Q12794 435 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 COL19A1Q14993 1142 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 GGNBP1Q5YKI7 109 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 TMEM179BQ7Z7N9 219 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 C1orf210Q8IVY1 113 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 ZBTB34Q8NCN2 500 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 ZNF764Q96H86 408 aaPredicted RBP5.75□□□□□ -1.49
UPF2-201ENST00000356352 KCNK15Q9H427 330 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 CACNG5Q9UF02 275 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 PKD1L3Q7Z443 1732 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 ELOA3CA0A087WX78 387 aaPredicted RBP5.74□□□□□ -1.49
UPF2-201ENST00000356352 ZNF273Q14593 569 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 DUSP18Q8NEJ0 188 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 DEFB124Q8NES8 71 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 STXBP6Q8NFX7 210 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 BLNKQ8WV28 456 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 ASB10Q8WXI3 467 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 RND1Q92730 232 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 SLC2A9Q9NRM0 540 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 PRNDQ9UKY0 176 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 STARD10Q9Y365 291 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 CTAG2O75638 210 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 PRR35P0CG20 571 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 CCR2P41597 374 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 RAC3P60763 192 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 LSM6P62312 80 aaKnown RBP5.74□□□□□ -1.49
UPF2-201ENST00000356352 UBE2L3P68036 154 aaKnown RBP5.74□□□□□ -1.49
UPF2-201ENST00000356352 MRPS11P82912 194 aaKnown RBP5.74□□□□□ -1.49
UPF2-201ENST00000356352 B4GALNT1Q00973 533 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 VWA1Q6PCB0 445 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 SLC25A42Q86VD7 318 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 OR2C3Q8N628 320 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 ZNF784Q8NCA9 323 aaPredicted RBP5.74□□□□□ -1.49
UPF2-201ENST00000356352 AP5S1Q9NUS5 200 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 PLEKHB1Q9UF11 243 aaPredicted RBP5.74□□□□□ -1.49
UPF2-201ENST00000356352 ZNF107Q9UII5 783 aaPredicted RBP5.74□□□□□ -1.49
UPF2-201ENST00000356352 DEFB108AA8MXU0 73 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 ASCL1P50553 236 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 UCNP55089 124 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 LBHQ53QV2 105 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms