RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 THBS4P35443 961 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 DGCR2P98153 550 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 PPP1R1CQ8WVI7 109 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 PTX4Q96A99 478 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 SLCO1C1Q9NYB5 712 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 RALYQ9UKM9 306 aaKnown RBP15.46■□□□□ 0.07
COL27A1-201ENST00000356083 CCL21O00585 134 aa15.46■□□□□ 0.06
COL27A1-201ENST00000356083 EGR3Q06889 387 aa15.46■□□□□ 0.06
COL27A1-201ENST00000356083 TWIST1Q15672 202 aa15.46■□□□□ 0.06
COL27A1-201ENST00000356083 EMC4Q5J8M3 183 aa15.46■□□□□ 0.06
COL27A1-201ENST00000356083 SPANXN1Q5VSR9 72 aa15.46■□□□□ 0.06
COL27A1-201ENST00000356083 C15orf39Q6ZRI6 1047 aa15.46■□□□□ 0.06
COL27A1-201ENST00000356083 CA13Q8N1Q1 262 aa15.46■□□□□ 0.06
COL27A1-201ENST00000356083 APOBEC3DQ96AK3 386 aaPredicted RBP15.46■□□□□ 0.06
COL27A1-201ENST00000356083 OR10C1Q96KK4 312 aa15.46■□□□□ 0.06
COL27A1-201ENST00000356083 SAP30LQ9HAJ7 183 aa15.46■□□□□ 0.06
COL27A1-201ENST00000356083 ALG1L2C9J202 215 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 TM4SF4P48230 202 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 OR2G2Q8NGZ5 317 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 ZNF426Q9BUY5 554 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 SNRPCP09234 159 aaKnown RBP15.45■□□□□ 0.06
COL27A1-201ENST00000356083 ZBP1Q9H171 429 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 THAP10Q9P2Z0 257 aaPredicted RBP15.45■□□□□ 0.06
COL27A1-201ENST00000356083 MROH1Q8NDA8 1641 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 MFNGO00587 321 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 DHODHQ02127 395 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 NAA60Q9H7X0 242 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 OCIAD1Q9NX40 245 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 ADRB1P08588 477 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 CD37P11049 281 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 LOXL3P58215 753 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 C1orf220Q5T0J3 134 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 PPP1R17O96001 155 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 GFRA1P56159 465 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 RAB37Q96AX2 223 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 MAP1LC3CQ9BXW4 147 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 NFAT5O94916 1531 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 HEATR5AQ86XA9 2040 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 IQCJQ1A5X6 159 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 ZNF793Q6ZN11 406 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 SPNS2Q8IVW8 549 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 WFDC5Q8TCV5 224 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 MS4A6EQ96DS6 147 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 P2RX4Q99571 388 aa15.45■□□□□ 0.06
COL27A1-201ENST00000356083 CD3DP04234 171 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 MPLP40238 635 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 OR1F12Q8NHA8 337 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 C10orf90Q96M02 699 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 TCRBV3S1A0A5B6 114 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 TEX37Q96LM6 180 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 OR4E1P0C645 316 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 MIDNQ504T8 468 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 PCED1AQ9H1Q7 454 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 IGHV3OR15-7A0A075B7D8 119 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 FRG2CA6NGY1 282 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 D2HGDHQ8N465 521 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 OIT3Q8WWZ8 545 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 EXTL1Q92935 676 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 TBX15Q96SF7 602 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 IL21Q9HBE4 155 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 SNX22Q96L94 193 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 LAT2Q9GZY6 243 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 HDGFL3Q9Y3E1 203 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 TARM1B6A8C7 271 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 RELBQ01201 579 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 GUCA2AQ02747 115 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 KLHDC9Q8NEP7 349 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 LRRC29Q8WV35 223 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 PLEKHA2Q9HB19 425 aa15.44■□□□□ 0.06
COL27A1-201ENST00000356083 ARNTLO00327 626 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 KLF7O75840 302 aaPredicted RBP15.43■□□□□ 0.06
COL27A1-201ENST00000356083 IZUMO4Q1ZYL8 232 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 MRGPREQ86SM8 312 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 hADV38S2A0JD32 116 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 MPDU1O75352 247 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 OR2D3Q8NGH3 330 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 RHOXF1Q8NHV9 184 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 GPR137Q96N19 417 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 MRPL13Q9BYD1 178 aaKnown RBP15.43■□□□□ 0.06
COL27A1-201ENST00000356083 RPS19P39019 145 aaKnown RBP15.43■□□□□ 0.06
COL27A1-201ENST00000356083 RPEL1Q2QD12 228 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 B3GNT9Q6UX72 402 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 PDLIM7Q9NR12 457 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 KLKB1P03952 638 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 ERVS71-1P61550 626 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 FOXF1Q12946 379 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 CLEC2AQ6UVW9 174 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 MRGPRX4Q96LA9 322 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 UQCC2Q9BRT2 126 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 PIK3C2AO00443 1686 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 RPS4XP62701 263 aaKnown RBP15.43■□□□□ 0.06
COL27A1-201ENST00000356083 GUK1Q16774 197 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 ZNF429Q86V71 674 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 FAM131CQ96AQ9 280 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 FCRL6Q6DN72 434 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 C1orf210Q8IVY1 113 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 NRG4Q8WWG1 115 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 FOXB1Q99853 325 aa15.43■□□□□ 0.06
COL27A1-201ENST00000356083 TRDV1A0A1B0GX56 115 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 OR5B21A6NL26 309 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms