RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 CARHSP1Q9Y2V2 147 aaKnown RBP9.31□□□□□ -0.92
RTN3-204ENST00000354497 A0A0B4J2E0 115 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 A0A1B0GX12 115 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 TRAPPC13A5PLN9 417 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 FABP12A6NFH5 140 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 ZNF670-ZNF695F2Z2N8 137 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 IMPA2O14732 288 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 SLC2A10O95528 541 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 CFDP00746 253 aaPredicted RBP9.31□□□□□ -0.92
RTN3-204ENST00000354497 MT-ND1P03886 318 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 HIST1H2ABP04908 130 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 SFTPBP07988 381 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 GSTM3P21266 225 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 PPP3R1P63098 170 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 LIPEQ05469 1076 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 EGR3Q06889 387 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 PSG7Q13046 419 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 ALKBH1Q13686 389 aaKnown RBP9.31□□□□□ -0.92
RTN3-204ENST00000354497 PLA1AQ53H76 456 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 LCE2CQ5TA81 110 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 HAGHLQ6PII5 290 aaPredicted RBP9.31□□□□□ -0.92
RTN3-204ENST00000354497 ATRAIDQ6UW56 229 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 Q6ZSV7 163 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 HIST3H2AQ7L7L0 130 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 NLRC3Q7RTR2 1065 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 SLC16A13Q7RTY0 426 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 RANBP3LQ86VV4 465 aaPredicted RBP9.31□□□□□ -0.92
RTN3-204ENST00000354497 SCCPDHQ8NBX0 429 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 BEND2Q8NDZ0 799 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 OR11H4Q8NGC9 324 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 NFKBIDQ8NI38 313 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 GATAD2BQ8WXI9 593 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 ASB13Q8WXK3 278 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 AP3S1Q92572 193 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 HIST1H2ACQ93077 130 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 RFKQ969G6 155 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 TMEM43Q9BTV4 400 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 TMED9Q9BVK6 235 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 SPATA5L1Q9BVQ7 753 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 ELOVL3Q9HB03 270 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 BCL2L10Q9HD36 194 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 CHMP1AQ9HD42 196 aaPredicted RBP9.31□□□□□ -0.92
RTN3-204ENST00000354497 SDR39U1Q9NRG7 319 aaPredicted RBP9.31□□□□□ -0.92
RTN3-204ENST00000354497 TAS2R5Q9NYW4 299 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 CNOT2Q9NZN8 540 aaKnown RBP9.31□□□□□ -0.92
RTN3-204ENST00000354497 CLN8Q9UBY8 286 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 IL19Q9UHD0 177 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 IGHV3-64DA0A0J9YX35 117 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 TMEM218A2RU14 115 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 HMSDA8MTL9 139 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 ITGB1BP1O14713 200 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 MBP02144 154 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 APOC3P02656 99 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 PTGFRP43088 359 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 MAGEA2P43356 314 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 HTR5AP47898 357 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 PSG4Q00888 419 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 FCN2Q15485 313 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 NRN1LQ496H8 165 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 RABL3Q5HYI8 236 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 TRIQKQ629K1 86 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 C11orf88Q6PI97 169 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 ARL9Q6T311 187 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 FAM131AQ6UXB0 335 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 Q6ZR03 302 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 MRPL52Q86TS9 123 aaKnown RBP9.3□□□□□ -0.92
RTN3-204ENST00000354497 OR5AS1Q8N127 324 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 C4orf45Q96LM5 186 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 C7orf50Q9BRJ6 194 aaKnown RBP9.3□□□□□ -0.92
RTN3-204ENST00000354497 POFUT1Q9H488 388 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 MAN2C1Q9NTJ4 1040 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 CCDC167Q9P0B6 97 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 AASSQ9UDR5 926 aa9.3□□□□□ -0.92
RTN3-204ENST00000354497 TEX13CA0A0J9YWL9 993 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 ZNF816-ZNF321PA0A0X1KG74 233 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 P2RY10O00398 339 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 TNFRSF13BO14836 293 aaPredicted RBP9.29□□□□□ -0.92
RTN3-204ENST00000354497 ENSAO43768 121 aaKnown RBP9.29□□□□□ -0.92
RTN3-204ENST00000354497 TOX4O94842 621 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 RAB3DO95716 219 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 ABHD16AO95870 558 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 SERPINA1P01009 418 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 OPN1MWP04001 364 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 F13BP05160 661 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 LPLP06858 475 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 OR4E1P0C645 316 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 OPN1MW2P0DN77 364 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 OPN1MW3P0DN78 364 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 SPP1P10451 314 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 ANXA7P20073 488 aaKnown RBP9.29□□□□□ -0.92
RTN3-204ENST00000354497 RAB2AP61019 212 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 NUTF2P61970 127 aaKnown RBP9.29□□□□□ -0.92
RTN3-204ENST00000354497 SEC23BQ15437 767 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 RGNQ15493 299 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 ZNF74Q16587 644 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 Q6ZTK2 550 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 ZNF561Q8N587 486 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 C11orf44Q8N8P7 122 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 CNIH3Q8TBE1 160 aa9.29□□□□□ -0.92
RTN3-204ENST00000354497 SLC25A46Q96AG3 418 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms