RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 RER1O15258 196 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 SERPINA5P05154 406 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 HPNP05981 417 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 HEXAP06865 529 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 HCKP08631 526 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 HOXB5P09067 269 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 SFTA3P0C7M3 94 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 CBX5P45973 191 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 ZNF121P58317 390 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-204ENST00000353317 SLC35A1P78382 337 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 ARG2P78540 354 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 SRYQ05066 204 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 ARFRP1Q13795 201 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 ACTBL2Q562R1 376 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 ZNF766Q5HY98 468 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.48□□□□□ -1.21
TRIM55-204ENST00000353317 FOXRED2Q8IWF2 684 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 ZFP62Q8NB50 900 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-204ENST00000353317 POC1AQ8NBT0 407 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 OR10D3Q8NH80 312 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 SAT2Q96F10 170 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-204ENST00000353317 C2orf50Q96LR7 162 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 OXGR1Q96P68 337 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 USB1Q9BQ65 265 aaKnown RBP7.48□□□□□ -1.21
TRIM55-204ENST00000353317 DEFB127Q9H1M4 99 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 TAF9BQ9HBM6 251 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 ASH2LQ9UBL3 628 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 BOKQ9UMX3 212 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-204ENST00000353317 OSGIN2Q9Y236 505 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 POLR1DQ9Y2S0 133 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 MRPS18CQ9Y3D5 142 aaKnown RBP7.48□□□□□ -1.21
TRIM55-204ENST00000353317 NBEAQ8NFP9 2946 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 ARHGAP21Q5T5U3 1957 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 PQLC2LA1A4F0 135 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 E9PLN8 166 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 RNASEK-C17orf49H0YIS7 233 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 AGPAT2O15120 278 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 AMY2BP19961 511 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 ID4P47928 161 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 RRADP55042 308 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 SNU13P55769 128 aaKnown RBP7.48□□□□□ -1.21
TRIM55-204ENST00000353317 CLDN17P56750 224 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 CLDN18P56856 261 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 S100A10P60903 97 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 HIST3H3Q16695 136 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 THEM4Q5T1C6 240 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 AVPI1Q5T686 147 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 IGFL2Q6UWQ7 119 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 C1QL2Q7Z5L3 287 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 UEVLDQ8IX04 471 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 ADPRHL1Q8NDY3 354 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 OR5D18Q8NGL1 313 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 GPER1Q99527 375 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 PLA2G2EQ9NZK7 142 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 RP1L1Q8IWN7 2480 aaPredicted RBP7.47□□□□□ -1.21
TRIM55-204ENST00000353317 RELNP78509 3460 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 TLN1Q9Y490 2541 aaKnown RBP7.47□□□□□ -1.21
TRIM55-204ENST00000353317 ZNF716A6NP11 495 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 COLCA2A8K830 154 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 MED6O75586 246 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 CEACAM4O75871 244 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 KNG1P01042 644 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 CD5P06127 495 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 FCGR3AP08637 254 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 ZNF43P17038 809 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 EIF2S3P41091 472 aaKnown RBP7.47□□□□□ -1.21
TRIM55-204ENST00000353317 CARD18P57730 90 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 OR2A2Q6IF42 318 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 CRIP3Q6Q6R5 217 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 ETV3LQ6ZN32 361 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 OR56B1Q8NGI3 324 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 SSC4DQ8WTU2 575 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 ABHD3Q8WU67 409 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 MOB1AQ9H8S9 216 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 PNRC2Q9NPJ4 139 aaKnown RBP7.47□□□□□ -1.21
TRIM55-204ENST00000353317 EHFQ9NZC4 300 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 ABI3Q9P2A4 366 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 DNAJB11Q9UBS4 358 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 LOC102725191A0A1B0GVB3 256 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 C5orf63A6NC05 138 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 FAM157AC9JC47 383 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 SFTPBP07988 381 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 PET100P0DJ07 73 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 HKR1P10072 659 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 CD80P33681 288 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 OR3A2P47893 321 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 MEOX2P50222 304 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 CLRN1P58418 232 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 RAC3P60763 192 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 CSNK2A1P68400 391 aaPredicted RBP7.47□□□□□ -1.21
TRIM55-204ENST00000353317 RBM39Q14498 530 aaKnown RBP7.47□□□□□ -1.21
TRIM55-204ENST00000353317 PEA15Q15121 130 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 DHRS11Q6UWP2 260 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 FAM89BQ8N5H3 189 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 PNLDC1Q8NA58 520 aaKnown RBP7.47□□□□□ -1.21
TRIM55-204ENST00000353317 CSNK2A3Q8NEV1 391 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 OR9K2Q8NGE7 335 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 OR2AJ1Q8NGZ0 328 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 SFT2D1Q8WV19 159 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 SCGB3A2Q96PL1 93 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms