RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 ARF1P84077 181 aaKnown RBP7.04□□□□□ -1.28
CD44-205ENST00000352818 IFITM2Q01629 132 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 FAPQ12884 760 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 PPA1Q15181 289 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 UBE2V2Q15819 145 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 CDNFQ49AH0 187 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 ACTBL2Q562R1 376 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 PABPC1L2AQ5JQF8 200 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 CLVS2Q5SYC1 327 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 SFRP5Q5T4F7 317 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 TMEM53Q6P2H8 277 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 ASCL4Q6XD76 172 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 LHFPL2Q6ZUX7 228 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 CHMP1BQ7LBR1 199 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 TRAPPC6BQ86SZ2 158 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 ZNF101Q8IZC7 436 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 STEAP2Q8NFT2 490 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 FGFBP3Q8TAT2 258 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 ASB13Q8WXK3 278 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 HYLS1Q96M11 299 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 GPER1Q99527 375 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 PRRG4Q9BZD6 226 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 OR10A4Q9H209 315 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 SLA2Q9H6Q3 261 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 RANBP3Q9H6Z4 567 aaPredicted RBP7.04□□□□□ -1.28
CD44-205ENST00000352818 B3GNT2Q9NY97 397 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 IL36GQ9NZH8 169 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 SPRR3Q9UBC9 169 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 CLCF1Q9UBD9 225 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 LPAR3Q9UBY5 353 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 FLVCR2Q9UPI3 526 aa7.04□□□□□ -1.28
CD44-205ENST00000352818 SLC22A20A6NK97 555 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 SERPINE3A8MV23 424 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 ZNF736B4DX44 427 aaPredicted RBP7.03□□□□□ -1.28
CD44-205ENST00000352818 DISC1C4P0D8 188 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 J3QW42 95 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 AQP7O14520 342 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 SSNA1O43805 119 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 CREBL2O60519 120 aaPredicted RBP7.03□□□□□ -1.28
CD44-205ENST00000352818 MPIG6BO95866 241 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 LCATP04180 440 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 SERPINA5P05154 406 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 ZNF735P0CB33 412 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 CPT2P23786 658 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 MPGP29372 298 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 RAD52P43351 418 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 OR3A2P47893 321 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 FAM3AP98173 230 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 GUSBP1Q15486 140 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 FAAP20Q6NZ36 180 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 SLC36A1Q7Z2H8 476 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 RNF144BQ7Z419 303 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 TMEM104Q8NE00 496 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 OR4D10Q8NGI6 311 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 OR51S1Q8NGJ8 323 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 CCDC107Q8WV48 283 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 TNFAIP8L1Q8WVP5 186 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 RAB3CQ96E17 227 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 GMPPAQ96IJ6 420 aaPredicted RBP7.03□□□□□ -1.28
CD44-205ENST00000352818 SPACA5Q96QH8 159 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 PRRT1Q99946 306 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 OCSTAMPQ9BR26 566 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 GINS4Q9BRT9 223 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 GON7Q9BXV9 100 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 SHARPINQ9H0F6 387 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 LDAHQ9H6V9 325 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 CALHM2Q9HA72 323 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 IFT46Q9NQC8 304 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 NKIRAS2Q9NYR9 191 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 ZNF629Q9UEG4 869 aaPredicted RBP7.03□□□□□ -1.28
CD44-205ENST00000352818 SCP2D1Q9UJQ7 156 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 TENM3Q9P273 2699 aa7.03□□□□□ -1.28
CD44-205ENST00000352818 ZNF816-ZNF321PA0A0X1KG74 233 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 UBE2QL1A1L167 161 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 TMPRSS2O15393 492 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 FABP7O15540 132 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 AKR7A2O43488 359 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 SSX5O60225 188 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 ZNF780AO75290 641 aaPredicted RBP7.02□□□□□ -1.29
CD44-205ENST00000352818 CRTAPO75718 401 aaPredicted RBP7.02□□□□□ -1.29
CD44-205ENST00000352818 SNAPC5O75971 98 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 OR2A4O95047 310 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 HPXP02790 462 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 AMY2AP04746 511 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 GIPP09681 153 aaPredicted RBP7.02□□□□□ -1.29
CD44-205ENST00000352818 MGMTP16455 207 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 GNG2P59768 71 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 GK2Q14410 553 aaPredicted RBP7.02□□□□□ -1.29
CD44-205ENST00000352818 MPPED2Q15777 294 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 NDUFA5Q16718 116 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 TMEM249Q2WGJ8 235 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 RNASE10Q5GAN6 216 aaKnown RBP7.02□□□□□ -1.29
CD44-205ENST00000352818 VAX1Q5SQQ9 334 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 FBXW9Q5XUX1 488 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 FAHD2BQ6P2I3 314 aaPredicted RBP7.02□□□□□ -1.29
CD44-205ENST00000352818 NUFIP2Q7Z417 695 aaKnown RBP7.02□□□□□ -1.29
CD44-205ENST00000352818 CCDC36Q8IYA8 594 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 ZDHHC22Q8N966 263 aa7.02□□□□□ -1.29
CD44-205ENST00000352818 ASCC1Q8N9N2 400 aaKnown RBP7.02□□□□□ -1.29
CD44-205ENST00000352818 CHST4Q8NCG5 386 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms