RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 Q6ZN92 141 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 OR51G1Q8NGK1 321 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 TXN2Q99757 166 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 PYGO2Q9BRQ0 406 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 AICDAQ9GZX7 198 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 NSG2Q9Y328 171 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 A0A0A6YYD5 115 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 VSTM2BA6NLU5 285 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 NDUFS8O00217 210 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 ZNF43P17038 809 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 OMGP23515 440 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 GALR1P47211 349 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 FOXK1P85037 733 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 PNRC1Q12796 327 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-203ENST00000349748 SLC8B1Q6J4K2 584 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 HSD11B1LQ7Z5J1 315 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 MCEMP1Q8IX19 187 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 PINX1Q96BK5 328 aaKnown RBP9.34□□□□□ -0.91
CAPN3-203ENST00000349748 NICN1Q9BSH3 213 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 ZNF160Q9HCG1 818 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 HSPB7Q9UBY9 170 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 TUBD1Q9UJT1 453 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 GPR34Q9UPC5 381 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 ENTPD2Q9Y5L3 495 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 VCANP13611 3396 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 C4orf51C9J302 202 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 TNFSF12O43508 249 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 LDB3O75112 727 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 OR6A2O95222 327 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 LINC00271P0C7V0 271 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 CD70P32970 193 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 BIDP55957 195 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 FAM3BP58499 235 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-203ENST00000349748 RUNX1Q01196 453 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 EIPR1Q53HC9 387 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 CHRDL2Q6WN34 429 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 Q7L0L9 218 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 OR4D5Q8NGN0 318 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 SNIP1Q8TAD8 396 aaKnown RBP9.34□□□□□ -0.91
CAPN3-203ENST00000349748 ASB5Q8WWX0 329 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 GABRG3Q99928 467 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 NKX2-4Q9H2Z4 354 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 ELL3Q9HB65 397 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-203ENST00000349748 ST3GAL6Q9Y274 331 aa9.34□□□□□ -0.91
CAPN3-203ENST00000349748 NSG1A0A0A6YYJ2 146 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 A0A1W2PNV4 684 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 FAM230AA0A1W2PPH8 454 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 MMP23AO75900 390 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 CTXN2P0C2S0 81 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 GLI4P10075 376 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 VIPR2P41587 438 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 CCR5P51681 352 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 MLF1P58340 268 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 CDK3Q00526 305 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 NHLH1Q02575 133 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 MESP2Q0VG99 397 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 ACOT6Q3I5F7 207 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-203ENST00000349748 RNF44Q7L0R7 432 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 CDC20BQ86Y33 519 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 ZNF619Q8N2I2 560 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 KCNE4Q8WWG9 221 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 TMEM56Q96MV1 263 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 SDF2Q99470 211 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 HSPB9Q9BQS6 159 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 VN1R1Q9GZP7 353 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 MAGT1Q9H0U3 335 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 MEGF9Q9H1U4 602 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 ELOVL3Q9HB03 270 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 C1orf123Q9NWV4 160 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 TMEM56-RWDD3S4R434 201 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 LOC102723971A0A1B0GUV8 181 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 GRIFINA4D1Z8 144 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 CSNK2A2P19784 350 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-203ENST00000349748 ARR3P36575 388 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 HNRNPA3P51991 378 aaKnown RBP9.33□□□□□ -0.92
CAPN3-203ENST00000349748 DUSP8Q13202 625 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 SP6Q3SY56 376 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 MEX3BQ6ZN04 569 aaKnown RBP9.33□□□□□ -0.92
CAPN3-203ENST00000349748 OR5AR1Q8NGP9 310 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 ZBP1Q9H171 429 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 B9D1Q9UPM9 204 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 EML5Q05BV3 1969 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 UNC80Q8N2C7 3258 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 CCDC163A0A0D9SF12 145 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 A6NJY4 79 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 AHRRA9YTQ3 701 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 MFGE8Q08431 387 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-203ENST00000349748 TXNDC8Q6A555 127 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 COX15Q7KZN9 410 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 TGIF2LYQ8IUE0 185 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 OR2D3Q8NGH3 330 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 CTDSP1Q9GZU7 261 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 SLC2A9Q9NRM0 540 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-203ENST00000349748 CLEC5AQ9NY25 188 aa9.33□□□□□ -0.92
CAPN3-203ENST00000349748 DOCK9Q9BZ29 2069 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 A0A0B4J2E0 115 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 A0A1B0GX12 115 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 MAP1LC3B2A6NCE7 125 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms