RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 PMP22Q01453 160 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 ACY3Q96HD9 319 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 DNAJC25-GNG10A0A024R161 153 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 ZNF716A6NP11 495 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 MASP2O00187 686 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 KCNAB3O43448 404 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 PI3P19957 117 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 C12orf73Q69YU5 71 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 VSTM2AQ8TAG5 236 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 TPSD1Q9BZJ3 242 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 PARP11Q9NR21 331 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 TECRQ9NZ01 308 aaKnown RBP17.37■□□□□ 0.37
HDAC4-201ENST00000345617 PRSS50Q9UI38 385 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 SSX1Q16384 188 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 SIRT6Q8N6T7 355 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 RPS4Y2Q8TD47 263 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 TMEM70Q9BUB7 260 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 MRPL37Q9BZE1 423 aaKnown RBP17.37■□□□□ 0.37
HDAC4-201ENST00000345617 COL6A6A6NMZ7 2263 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 ZNF816Q0VGE8 651 aaPredicted RBP17.37■□□□□ 0.37
HDAC4-201ENST00000345617 HCFC1R1Q9NWW0 138 aa17.36■□□□□ 0.37
HDAC4-201ENST00000345617 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.36■□□□□ 0.379e-7■■■□□ 17.6
HDAC4-201ENST00000345617 C3orf85A0A1B0GTC6 90 aa17.36■□□□□ 0.37
HDAC4-201ENST00000345617 OR1F12Q8NHA8 337 aa17.36■□□□□ 0.37
HDAC4-201ENST00000345617 SLC46A2Q9BY10 475 aa17.36■□□□□ 0.37
HDAC4-201ENST00000345617 PPP2CAP67775 309 aa17.36■□□□□ 0.37
HDAC4-201ENST00000345617 FAM78BQ5VT40 261 aa17.36■□□□□ 0.37
HDAC4-201ENST00000345617 ETV3LQ6ZN32 361 aa17.36■□□□□ 0.37
HDAC4-201ENST00000345617 RNF165Q6ZSG1 346 aa17.36■□□□□ 0.37
HDAC4-201ENST00000345617 NUFIP2Q7Z417 695 aaKnown RBP17.36■□□□□ 0.37
HDAC4-201ENST00000345617 OR4B1Q8NGF8 309 aa17.36■□□□□ 0.37
HDAC4-201ENST00000345617 OR2D3Q8NGH3 330 aa17.36■□□□□ 0.37
HDAC4-201ENST00000345617 LRP12Q9Y561 859 aa17.36■□□□□ 0.37
HDAC4-201ENST00000345617 KLF13Q9Y2Y9 288 aaPredicted RBP17.36■□□□□ 0.37
HDAC4-201ENST00000345617 ZNF785A8K8V0 405 aa17.36■□□□□ 0.37
HDAC4-201ENST00000345617 ACTL6AO96019 429 aa17.36■□□□□ 0.37
HDAC4-201ENST00000345617 CRYAAP02489 173 aa17.36■□□□□ 0.37
HDAC4-201ENST00000345617 ICOSLGO75144 302 aa17.36■□□□□ 0.37
HDAC4-201ENST00000345617 KMT5CQ86Y97 462 aa17.36■□□□□ 0.37
HDAC4-201ENST00000345617 OR10G4Q8NGN3 311 aa17.36■□□□□ 0.37
HDAC4-201ENST00000345617 OR10G9Q8NGN4 311 aa17.36■□□□□ 0.37
HDAC4-201ENST00000345617 OR10G7Q8NGN6 311 aa17.36■□□□□ 0.37
HDAC4-201ENST00000345617 CACNA1GO43497 2377 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 ACAA1P09110 424 aaPredicted RBP17.35■□□□□ 0.37
HDAC4-201ENST00000345617 MORN1Q5T089 497 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 MRGPRGQ86SM5 289 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 TMEM251Q8N6I4 163 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 TINAGL1Q9GZM7 467 aaPredicted RBP17.35■□□□□ 0.37
HDAC4-201ENST00000345617 ZC3H12DA2A288 527 aaKnown RBP17.35■□□□□ 0.37
HDAC4-201ENST00000345617 CXorf1O96002 111 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 ZNF865P0CJ78 1059 aaPredicted RBP17.35■□□□□ 0.37
HDAC4-201ENST00000345617 RPL30P62888 115 aaKnown RBP17.35■□□□□ 0.37
HDAC4-201ENST00000345617 RELBQ01201 579 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 TMEM207Q6UWW9 146 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 SEZ6L2Q6UXD5 910 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 TRPM3Q9HCF6 1732 aaPredicted RBP17.35■□□□□ 0.37
HDAC4-201ENST00000345617 PSMG4Q5JS54 123 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 GLCCI1Q86VQ1 547 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 OR5A2Q8NGI9 324 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 TMEM38BQ9NVV0 291 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 ABCA7Q8IZY2 2146 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 PSME4Q14997 1843 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 SLC37A1P57057 533 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 H3BVH4 76 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 P01737 135 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 ASTLQ6HA08 431 aaPredicted RBP17.35■□□□□ 0.37
HDAC4-201ENST00000345617 TMEM116Q8NCL8 245 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 ADAMTS5Q9UNA0 930 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 EXOGQ9Y2C4 368 aaKnown RBP17.35■□□□□ 0.37
HDAC4-201ENST00000345617 GNG3P63215 75 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 RNPS1Q15287 305 aaKnown RBP17.35■□□□□ 0.37
HDAC4-201ENST00000345617 TMEM215Q68D42 235 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 SLC36A1Q7Z2H8 476 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 SLC7A10Q9NS82 523 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 PRSS1P07477 247 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 DLX1P56177 255 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 RPS19BP1Q86WX3 136 aaKnown RBP17.35■□□□□ 0.37
HDAC4-201ENST00000345617 BAHD1Q8TBE0 780 aaPredicted RBP17.35■□□□□ 0.37
HDAC4-201ENST00000345617 FBXL17Q9UF56 701 aa17.35■□□□□ 0.37
HDAC4-201ENST00000345617 HLA-DRB5Q30154 266 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 GPX7Q96SL4 187 aaPredicted RBP17.34■□□□□ 0.37
HDAC4-201ENST00000345617 B9D1Q9UPM9 204 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 AVPR2P30518 371 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 MLF2Q15773 248 aaPredicted RBP17.34■□□□□ 0.37
HDAC4-201ENST00000345617 OR5AS1Q8N127 324 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 MYOZ3Q8TDC0 251 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 GAL3ST2Q9H3Q3 398 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 FAM206AQ9NX38 181 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 RHBDL1O75783 438 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 CBR3O75828 277 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 LINC00596Q86U02 117 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 A4GNTQ9UNA3 340 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 GLI4P10075 376 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 TRILQ7L0X0 811 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 MRPL43Q8N983 215 aaKnown RBP17.34■□□□□ 0.37
HDAC4-201ENST00000345617 SIGLEC11Q96RL6 698 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 ICAM5Q9UMF0 924 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 PROCRQ9UNN8 238 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 TMEM33P57088 247 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 MCHR2Q969V1 340 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms