RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 PCNX2A6NKB5 2137 aa16.4■□□□□ 0.22
PSPC1-201ENST00000338910 CDC14BO60729 498 aa16.39■□□□□ 0.21
PSPC1-201ENST00000338910 IFNA2P01563 188 aa16.39■□□□□ 0.21
PSPC1-201ENST00000338910 IGHG1P01857 330 aa16.39■□□□□ 0.21
PSPC1-201ENST00000338910 AMY2BP19961 511 aa16.39■□□□□ 0.21
PSPC1-201ENST00000338910 RAET1LQ5VY80 246 aa16.39■□□□□ 0.21
PSPC1-201ENST00000338910 PPP1R32Q7Z5V6 425 aa16.39■□□□□ 0.21
PSPC1-201ENST00000338910 OXGR1Q96P68 337 aa16.39■□□□□ 0.21
PSPC1-201ENST00000338910 KLHL13Q9P2N7 655 aa16.39■□□□□ 0.21
PSPC1-201ENST00000338910 HDGFL3Q9Y3E1 203 aa16.39■□□□□ 0.21
PSPC1-201ENST00000338910 SDCBPO00560 298 aaPredicted RBP16.39■□□□□ 0.21
PSPC1-201ENST00000338910 YIF1AO95070 293 aa16.39■□□□□ 0.21
PSPC1-201ENST00000338910 PGA4P0DJD7 388 aa16.39■□□□□ 0.21
PSPC1-201ENST00000338910 PGA3P0DJD8 388 aa16.39■□□□□ 0.21
PSPC1-201ENST00000338910 LIFP15018 202 aa16.39■□□□□ 0.21
PSPC1-201ENST00000338910 RAB1AP62820 205 aa16.39■□□□□ 0.21
PSPC1-201ENST00000338910 ZNF616Q08AN1 781 aa16.39■□□□□ 0.21
PSPC1-201ENST00000338910 HEPN1Q6WQI6 88 aa16.39■□□□□ 0.21
PSPC1-201ENST00000338910 EMG1Q92979 244 aaKnown RBP16.39■□□□□ 0.21
PSPC1-201ENST00000338910 ERGIC1Q969X5 290 aa16.39■□□□□ 0.21
PSPC1-201ENST00000338910 ZPBPQ9BS86 351 aa16.39■□□□□ 0.21
PSPC1-201ENST00000338910 TUBD1Q9UJT1 453 aa16.39■□□□□ 0.21
PSPC1-201ENST00000338910 MRPS28Q9Y2Q9 187 aaKnown RBP16.39■□□□□ 0.21
PSPC1-201ENST00000338910 ZIC3O60481 467 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 LMO1P25800 156 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 PTGER4P35408 488 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 RPS23P62266 143 aaKnown RBP16.38■□□□□ 0.21
PSPC1-201ENST00000338910 Q0VFX4 171 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 DHRS13Q6UX07 377 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 PNLDC1Q8NA58 520 aaKnown RBP16.38■□□□□ 0.21
PSPC1-201ENST00000338910 KCNG3Q8TAE7 436 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 SLAMF6Q96DU3 332 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 ARHGAP5-AS1Q96IT6 56 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 PBOV1Q9GZY1 135 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 BANF2Q9H503 90 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 OPA3Q9H6K4 179 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 TMEM9BQ9NQ34 198 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 C1orf123Q9NWV4 160 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 FOXJ2Q9P0K8 574 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 SEC11BP0C7V7 166 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 OR3A2P47893 321 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 CDX1P47902 265 aaPredicted RBP16.38■□□□□ 0.21
PSPC1-201ENST00000338910 HIST2H3AQ71DI3 136 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 ADPRHL1Q8NDY3 354 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 NOXO1Q8NFA2 376 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 AKR7LQ8NHP1 331 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 SLC35B3Q9H1N7 401 aa16.38■□□□□ 0.21
PSPC1-201ENST00000338910 OTOGLQ3ZCN5 2332 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 IGHV3-15A0A0B4J1V0 119 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 A0A1W2PP11 408 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 AQP7P3A6NL99 342 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 GALR2O43603 387 aaPredicted RBP16.37■□□□□ 0.21
PSPC1-201ENST00000338910 FHITP49789 147 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 SLC35A1P78382 337 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 DEFA6Q01524 100 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 CDCP2Q5VXM1 449 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 CD300LFQ8TDQ1 290 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 LIN37Q96GY3 246 aaPredicted RBP16.37■□□□□ 0.21
PSPC1-201ENST00000338910 DDA1Q9BW61 102 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 TMEM59Q9BXS4 323 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 SPRY4Q9C004 299 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 CHST5Q9GZS9 411 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 SH2D2AQ9NP31 389 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 LUZP4Q9P127 313 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 DKKL1Q9UK85 242 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 A0A087WZY1 265 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 ZNF726A6NNF4 738 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 KNG1P01042 644 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 OR3A4PP47883 348 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 DSCR4P56555 118 aaPredicted RBP16.37■□□□□ 0.21
PSPC1-201ENST00000338910 KIAA0141Q14154 515 aaPredicted RBP16.37■□□□□ 0.21
PSPC1-201ENST00000338910 OR5AS1Q8N127 324 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 OR6X1Q8NH79 312 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 KCNJ16Q9NPI9 418 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 EHFQ9NZC4 300 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 POLR1DQ9Y2S0 133 aa16.37■□□□□ 0.21
PSPC1-201ENST00000338910 PHF3Q92576 2039 aaKnown RBP16.36■□□□□ 0.21
PSPC1-201ENST00000338910 MT-CO3P00414 261 aa16.36■□□□□ 0.21
PSPC1-201ENST00000338910 IGHEP01854 428 aa16.36■□□□□ 0.21
PSPC1-201ENST00000338910 CD63P08962 238 aa16.36■□□□□ 0.21
PSPC1-201ENST00000338910 QDPRP09417 244 aa16.36■□□□□ 0.21
PSPC1-201ENST00000338910 FKBP2P26885 142 aaKnown RBP16.36■□□□□ 0.21
PSPC1-201ENST00000338910 ZNF84P51523 738 aa16.36■□□□□ 0.21
PSPC1-201ENST00000338910 CLDN17P56750 224 aa16.36■□□□□ 0.21
PSPC1-201ENST00000338910 ARFRP1Q13795 201 aa16.36■□□□□ 0.21
PSPC1-201ENST00000338910 SURF2Q15527 256 aaPredicted RBP16.36■□□□□ 0.21
PSPC1-201ENST00000338910 CDPF1Q6NVV7 123 aa16.36■□□□□ 0.21
PSPC1-201ENST00000338910 RPUSD3Q6P087 351 aaKnown RBP16.36■□□□□ 0.21
PSPC1-201ENST00000338910 OR10S1Q8NGN2 331 aa16.36■□□□□ 0.21
PSPC1-201ENST00000338910 FNDC9Q8TBE3 224 aa16.36■□□□□ 0.21
PSPC1-201ENST00000338910 ST6GALNAC5Q9BVH7 336 aa16.36■□□□□ 0.21
PSPC1-201ENST00000338910 PLEKHA2Q9HB19 425 aa16.36■□□□□ 0.21
PSPC1-201ENST00000338910 OR2C1O95371 312 aa16.36■□□□□ 0.21
PSPC1-201ENST00000338910 ITGA3P26006 1051 aa16.36■□□□□ 0.21
PSPC1-201ENST00000338910 RBMXP38159 391 aaKnown RBP16.36■□□□□ 0.21
PSPC1-201ENST00000338910 SUCLG1P53597 346 aaKnown RBP16.36■□□□□ 0.21
PSPC1-201ENST00000338910 SNU13P55769 128 aaKnown RBP16.36■□□□□ 0.21
PSPC1-201ENST00000338910 TAS2R46P59540 309 aa16.36■□□□□ 0.21
PSPC1-201ENST00000338910 BSCL2Q96G97 398 aaPredicted RBP16.36■□□□□ 0.21
PSPC1-201ENST00000338910 C19orf12Q9NSK7 152 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms