RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 COL9A1P20849 921 aa21.31■■□□□ 1
SOX1-201ENST00000330949 BLVRBP30043 206 aaPredicted RBP21.31■■□□□ 1
SOX1-201ENST00000330949 TMEM196Q5HYL7 178 aa21.31■■□□□ 1
SOX1-201ENST00000330949 OR51E1Q8TCB6 317 aa21.31■■□□□ 1
SOX1-201ENST00000330949 SRD5A3Q9H8P0 318 aa21.31■■□□□ 1
SOX1-201ENST00000330949 METTL12A8MUP2 240 aa21.31■■□□□ 1
SOX1-201ENST00000330949 IL33O95760 270 aa21.31■■□□□ 1
SOX1-201ENST00000330949 LINC00614P0C842 121 aa21.31■■□□□ 1
SOX1-201ENST00000330949 PAX5Q02548 391 aa21.31■■□□□ 1
SOX1-201ENST00000330949 TLE4Q04727 773 aa21.31■■□□□ 1
SOX1-201ENST00000330949 SP6Q3SY56 376 aa21.31■■□□□ 1
SOX1-201ENST00000330949 RTL10Q7L3V2 364 aa21.31■■□□□ 1
SOX1-201ENST00000330949 OR52M1Q8NGK5 317 aa21.31■■□□□ 1
SOX1-201ENST00000330949 SLAMF6Q96DU3 332 aa21.31■■□□□ 1
SOX1-201ENST00000330949 PECRQ9BY49 303 aa21.31■■□□□ 1
SOX1-201ENST00000330949 OR8D2Q9GZM6 311 aa21.31■■□□□ 1
SOX1-201ENST00000330949 PLPP3O14495 311 aa21.3■■□□□ 1
SOX1-201ENST00000330949 HCRTR2O43614 444 aa21.3■■□□□ 1
SOX1-201ENST00000330949 SOX15O60248 233 aa21.3■■□□□ 1
SOX1-201ENST00000330949 CSNK1A1P48729 337 aa21.3■■□□□ 1
SOX1-201ENST00000330949 ASCL1P50553 236 aa21.3■■□□□ 1
SOX1-201ENST00000330949 IGLV3-21P80748 117 aaPredicted RBP21.3■■□□□ 1
SOX1-201ENST00000330949 SCARF2Q96GP6 870 aaPredicted RBP21.3■■□□□ 1
SOX1-201ENST00000330949 M0QZK8 103 aa21.3■■□□□ 1
SOX1-201ENST00000330949 GGCTO75223 188 aaKnown RBP21.3■■□□□ 1
SOX1-201ENST00000330949 PITX3O75364 302 aa21.3■■□□□ 1
SOX1-201ENST00000330949 EPHA1P21709 976 aa21.3■■□□□ 1
SOX1-201ENST00000330949 OR2C3Q8N628 320 aa21.3■■□□□ 1
SOX1-201ENST00000330949 ELSPBP1Q96BH3 223 aa21.3■■□□□ 1
SOX1-201ENST00000330949 SYT3Q9BQG1 590 aa21.3■■□□□ 1
SOX1-201ENST00000330949 HIPK2Q9H2X6 1198 aa21.3■■□□□ 1
SOX1-201ENST00000330949 HSF4Q9ULV5 492 aa21.3■■□□□ 1
SOX1-201ENST00000330949 FMODQ06828 376 aa21.29■■□□□ 1
SOX1-201ENST00000330949 ABCA11PQ4W5N1 156 aa21.29■■□□□ 1
SOX1-201ENST00000330949 COMMD2Q86X83 199 aa21.29■■□□□ 1
SOX1-201ENST00000330949 ZNF283Q8N7M2 679 aa21.29■■□□□ 1
SOX1-201ENST00000330949 ZNF248Q8NDW4 579 aa21.29■■□□□ 1
SOX1-201ENST00000330949 CTDSP1Q9GZU7 261 aa21.29■■□□□ 1
SOX1-201ENST00000330949 PRTFDC1Q9NRG1 225 aa21.29■■□□□ 1
SOX1-201ENST00000330949 CBLN4Q9NTU7 201 aa21.29■■□□□ 1
SOX1-201ENST00000330949 RFNGQ9Y644 331 aa21.29■■□□□ 1
SOX1-201ENST00000330949 DOCK8Q8NF50 2099 aa21.29■■□□□ 1
SOX1-201ENST00000330949 XKRY2A2RUG3 117 aa21.29■■□□□ 1
SOX1-201ENST00000330949 CDC14CA4D256 554 aa21.29■■□□□ 1
SOX1-201ENST00000330949 ZNF43P17038 809 aa21.29■■□□□ 1
SOX1-201ENST00000330949 HNRNPKP61978 463 aaKnown RBP eCLIP21.29■■□□□ 1
SOX1-201ENST00000330949 NOXO1Q8NFA2 376 aa21.29■■□□□ 1
SOX1-201ENST00000330949 GNPNAT1Q96EK6 184 aaPredicted RBP21.29■■□□□ 1
SOX1-201ENST00000330949 SEC16AO15027 2179 aa21.28■■□□□ 1
SOX1-201ENST00000330949 FOXI3A8MTJ6 420 aaPredicted RBP21.28■■□□□ 1
SOX1-201ENST00000330949 LINC01565O15544 149 aa21.28■■□□□ 1
SOX1-201ENST00000330949 CA11O75493 328 aa21.28■■□□□ 1
SOX1-201ENST00000330949 NUDT14O95848 222 aa21.28■■□□□ 1
SOX1-201ENST00000330949 PGA3P0DJD8 388 aa21.28■■□□□ 1
SOX1-201ENST00000330949 COL10A1Q03692 680 aa21.28■■□□□ 1
SOX1-201ENST00000330949 RTN4IP1Q8WWV3 396 aaPredicted RBP21.28■■□□□ 1
SOX1-201ENST00000330949 C18orf12Q96KH6 178 aa21.28■■□□□ 1
SOX1-201ENST00000330949 VN1R1Q9GZP7 353 aa21.28■■□□□ 1
SOX1-201ENST00000330949 BRWD1Q9NSI6 2320 aa21.28■■□□□ 1
SOX1-201ENST00000330949 ATXN7O15265 892 aaPredicted RBP21.28■■□□□ 1
SOX1-201ENST00000330949 PLRG1O43660 514 aaKnown RBP21.28■■□□□ 1
SOX1-201ENST00000330949 C1orf189Q5VU69 101 aa21.28■■□□□ 1
SOX1-201ENST00000330949 LIAT1Q6ZQX7 453 aa21.28■■□□□ 1
SOX1-201ENST00000330949 THNSL2Q86YJ6 484 aa21.28■■□□□ 1
SOX1-201ENST00000330949 ACY3Q96HD9 319 aa21.28■■□□□ 1
SOX1-201ENST00000330949 MOB1AQ9H8S9 216 aa21.28■■□□□ 1
SOX1-201ENST00000330949 DHRS7CA6NNS2 312 aa21.28■■□□□ 1
SOX1-201ENST00000330949 TOX3O15405 576 aaPredicted RBP21.28■■□□□ 1
SOX1-201ENST00000330949 AHSA1O95433 338 aa21.28■■□□□ 1
SOX1-201ENST00000330949 ALDH3B1P43353 468 aa21.28■■□□□ 1
SOX1-201ENST00000330949 RAB11AP62491 216 aa21.28■■□□□ 1
SOX1-201ENST00000330949 METTL27Q8N6F8 245 aaPredicted RBP21.28■■□□□ 1
SOX1-201ENST00000330949 DNASE2BQ8WZ79 361 aa21.28■■□□□ 1
SOX1-201ENST00000330949 TMEM18Q96B42 140 aa21.28■■□□□ 1
SOX1-201ENST00000330949 REEP6Q96HR9 211 aa21.28■■□□□ 1
SOX1-201ENST00000330949 HIST1H2AAQ96QV6 131 aa21.28■■□□□ 1
SOX1-201ENST00000330949 IGKV1D-8A0A087WSZ0 117 aa21.27■■□□□ 1
SOX1-201ENST00000330949 LOC102723971A0A1B0GUV8 181 aa21.27■■□□□ 1
SOX1-201ENST00000330949 HOXB2P14652 356 aa21.27■■□□□ 1
SOX1-201ENST00000330949 FOXF1Q12946 379 aa21.27■■□□□ 1
SOX1-201ENST00000330949 FAM90A2PQ658T7 463 aa21.27■■□□□ 1
SOX1-201ENST00000330949 P4HA3Q7Z4N8 544 aa21.27■■□□□ 1
SOX1-201ENST00000330949 LGI3Q8N145 548 aa21.27■■□□□ 1
SOX1-201ENST00000330949 MYOTQ9UBF9 498 aa21.27■■□□□ 1
SOX1-201ENST00000330949 ZNF732B4DXR9 585 aa21.27■□□□□ 0.99
SOX1-201ENST00000330949 DBHP09172 617 aa21.27■□□□□ 0.99
SOX1-201ENST00000330949 GP1BBP13224 206 aa21.27■□□□□ 0.99
SOX1-201ENST00000330949 DPPA3Q6W0C5 159 aa21.27■□□□□ 0.99
SOX1-201ENST00000330949 ABHD12BQ7Z5M8 362 aaPredicted RBP21.27■□□□□ 0.99
SOX1-201ENST00000330949 OPN3Q9H1Y3 402 aaPredicted RBP21.27■□□□□ 0.99
SOX1-201ENST00000330949 SLC7A11Q9UPY5 501 aa21.27■□□□□ 0.99
SOX1-201ENST00000330949 RPLP1P05386 114 aaKnown RBP21.26■□□□□ 0.99
SOX1-201ENST00000330949 CELA2BP08218 269 aaPredicted RBP21.26■□□□□ 0.99
SOX1-201ENST00000330949 KIR2DL1P43626 348 aaPredicted RBP21.26■□□□□ 0.99
SOX1-201ENST00000330949 ZNF880Q6PDB4 577 aa21.26■□□□□ 0.99
SOX1-201ENST00000330949 HRASLS2Q9NWW9 162 aa21.26■□□□□ 0.99
SOX1-201ENST00000330949 TMEM210A6NLX4 147 aa21.26■□□□□ 0.99
SOX1-201ENST00000330949 NPIPB7O75200 414 aa21.26■□□□□ 0.99
SOX1-201ENST00000330949 KLF8O95600 359 aaPredicted RBP21.26■□□□□ 0.99
SOX1-201ENST00000330949 MDKP21741 143 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms