RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 SWI5Q1ZZU3 235 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 OR52I2Q8NH67 350 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 PAPOLGQ9BWT3 736 aaKnown RBP13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 CACNG6Q9BXT2 260 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 CBLN4Q9NTU7 201 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 ANKRD20A5PA0PJZ0 165 aa13.98□□□□□ -0.17
PDLIM1-201ENST00000329399 PFDN1O60925 122 aa13.98□□□□□ -0.17
PDLIM1-201ENST00000329399 CYB5AP00167 134 aa13.98□□□□□ -0.17
PDLIM1-201ENST00000329399 TMEM225BP0DP42 221 aa13.98□□□□□ -0.17
PDLIM1-201ENST00000329399 SLC6A1P30531 599 aa13.98□□□□□ -0.17
PDLIM1-201ENST00000329399 BCAP31P51572 246 aa13.98□□□□□ -0.17
PDLIM1-201ENST00000329399 PDZK1IP1Q13113 114 aa13.98□□□□□ -0.17
PDLIM1-201ENST00000329399 PRDX4Q13162 271 aa13.98□□□□□ -0.17
PDLIM1-201ENST00000329399 KLF9Q13886 244 aaPredicted RBP13.98□□□□□ -0.17
PDLIM1-201ENST00000329399 RSU1Q15404 277 aa13.98□□□□□ -0.17
PDLIM1-201ENST00000329399 AGAP6Q5VW22 663 aa13.98□□□□□ -0.17
PDLIM1-201ENST00000329399 MKXQ8IYA7 352 aa13.98□□□□□ -0.17
PDLIM1-201ENST00000329399 FBXL14Q8N1E6 418 aa13.98□□□□□ -0.17
PDLIM1-201ENST00000329399 GPX8Q8TED1 209 aa13.98□□□□□ -0.17
PDLIM1-201ENST00000329399 AQP3Q92482 292 aa13.98□□□□□ -0.17
PDLIM1-201ENST00000329399 Q96MF0 132 aa13.98□□□□□ -0.17
PDLIM1-201ENST00000329399 SMR3AQ99954 134 aa13.98□□□□□ -0.17
PDLIM1-201ENST00000329399 LPAR5Q9H1C0 372 aa13.98□□□□□ -0.17
PDLIM1-201ENST00000329399 FAM230AA0A1W2PPH8 454 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 PQLC2LA1A4F0 135 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 FUOMA2VDF0 154 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 FAM90A10PA6NDY2 464 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 FAM90A18PA6NE21 464 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 FAM90A16PA6NEW6 464 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 FAM90A20PA6NIJ5 464 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 FAM90A8PA6NJQ4 464 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 FAM90A7PA6NKC0 464 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 ZNF850A8MQ14 1090 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 FAM90A22PA8MWA6 464 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 FAM90A12PA8MX19 464 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 FAM90A5PA8MXJ8 464 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 FAM90A23PA8MXZ1 464 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 LANCL1O43813 399 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 CRTAPO75718 401 aaPredicted RBP13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 LY6HO94772 140 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 MPIG6BO95866 241 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 CD3GP09693 182 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 OR4A8P0C604 315 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 FAM90A15PP0C7V4 464 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 FAM90A13PP0C7W8 464 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 FAM90A14PP0C7W9 464 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 FAM90A24PP0C7X0 464 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 GTF2F2P13984 249 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 CD99P14209 185 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 CBX5P45973 191 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 RAG2P55895 527 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 ZNF260Q3ZCT1 412 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 CRIP3Q6Q6R5 217 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 RFPL4BQ6ZWI9 263 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 IZUMO1Q8IYV9 350 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 ZCCHC24Q8N2G6 241 aaKnown RBP13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 Q8NFD4 153 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 CREB3L1Q96BA8 519 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 SPACA5Q96QH8 159 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 DPAGT1Q9H3H5 408 aa13.97□□□□□ -0.17
PDLIM1-201ENST00000329399 IQCF6A8MYZ5 107 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 MGMTP16455 207 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 TBPP20226 339 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 SERPINF1P36955 418 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 BTG1P62324 171 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 GNG3P63215 75 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 MZT1Q08AG7 82 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 PLA2G7Q13093 441 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 MADCAM1Q13477 382 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 ZNF718Q3SXZ3 478 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 SLC22A6Q4U2R8 563 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 SHEQ5VZ18 495 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 OLFML2AQ68BL7 652 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 LRP11Q86VZ4 500 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 ZNF573Q86YE8 665 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 DTX3Q8N9I9 347 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 SPERTQ8NA61 448 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 NUP37Q8NFH4 326 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 OR1J1Q8NGS3 322 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 CHAC2Q8WUX2 184 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 RAB3CQ96E17 227 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 GAL3ST1Q99999 423 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 MICU1Q9BPX6 476 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 MARVELD1Q9BSK0 173 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 GSX1Q9H4S2 264 aaPredicted RBP13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 FZR1Q9UM11 496 aa13.96□□□□□ -0.17
PDLIM1-201ENST00000329399 SERPINE3A8MV23 424 aa13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 FAM157BP0CG42 384 aa13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 KITLGP21583 273 aa13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 PMELP40967 661 aa13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 VEGFCP49767 419 aa13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 RPS23P62266 143 aaKnown RBP13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 HLXQ14774 488 aaPredicted RBP13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 CDNFQ49AH0 187 aa13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 MBNL2Q5VZF2 373 aaKnown RBP13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 ELP2Q6IA86 826 aa13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 PRSS57Q6UWY2 283 aa13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 TMEM229BQ8NBD8 167 aa13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 OR51T1Q8NGJ9 327 aa13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 NPRL2Q8WTW4 380 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms