RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 FAM186AA6NE01 2351 aa16.97■□□□□ 0.31
ZNF554-201ENST00000317243 A6NIZ1 184 aa16.97■□□□□ 0.31
ZNF554-201ENST00000317243 DKK1O94907 266 aa16.97■□□□□ 0.31
ZNF554-201ENST00000317243 TBPP20226 339 aa16.97■□□□□ 0.31
ZNF554-201ENST00000317243 RAP1BP61224 184 aa16.97■□□□□ 0.31
ZNF554-201ENST00000317243 TCEAL6Q6IPX3 200 aa16.97■□□□□ 0.31
ZNF554-201ENST00000317243 OR5L2Q8NGL0 311 aa16.97■□□□□ 0.31
ZNF554-201ENST00000317243 CPNE4Q96A23 557 aaPredicted RBP16.97■□□□□ 0.31
ZNF554-201ENST00000317243 BSCL2Q96G97 398 aaPredicted RBP16.97■□□□□ 0.31
ZNF554-201ENST00000317243 GUCD1Q96NT3 240 aa16.97■□□□□ 0.31
ZNF554-201ENST00000317243 CNTNAP3Q9BZ76 1288 aa16.97■□□□□ 0.31
ZNF554-201ENST00000317243 TNRC6BQ9UPQ9 1833 aaKnown RBP16.97■□□□□ 0.31
ZNF554-201ENST00000317243 TECTAO75443 2155 aa16.96■□□□□ 0.31
ZNF554-201ENST00000317243 KNTC1P50748 2209 aa16.96■□□□□ 0.31
ZNF554-201ENST00000317243 BTBD17A6NE02 478 aa16.96■□□□□ 0.31
ZNF554-201ENST00000317243 CAMLGP49069 296 aa16.96■□□□□ 0.31
ZNF554-201ENST00000317243 TMEM50BP56557 158 aa16.96■□□□□ 0.31
ZNF554-201ENST00000317243 PCK2Q16822 640 aa16.96■□□□□ 0.31
ZNF554-201ENST00000317243 UEVLDQ8IX04 471 aa16.96■□□□□ 0.31
ZNF554-201ENST00000317243 RNF138Q8WVD3 245 aa16.96■□□□□ 0.31
ZNF554-201ENST00000317243 UCN2Q96RP3 112 aa16.96■□□□□ 0.31
ZNF554-201ENST00000317243 SLC35B3Q9H1N7 401 aa16.96■□□□□ 0.31
ZNF554-201ENST00000317243 BOD1L1Q8NFC6 3051 aa16.96■□□□□ 0.31
ZNF554-201ENST00000317243 PGA4P0DJD7 388 aa16.96■□□□□ 0.3
ZNF554-201ENST00000317243 PGA3P0DJD8 388 aa16.96■□□□□ 0.3
ZNF554-201ENST00000317243 HIST1H1DP16402 221 aaKnown RBP16.96■□□□□ 0.3
ZNF554-201ENST00000317243 PRSS12P56730 875 aa16.96■□□□□ 0.3
ZNF554-201ENST00000317243 LSM6P62312 80 aaKnown RBP16.96■□□□□ 0.3
ZNF554-201ENST00000317243 IAH1Q2TAA2 248 aaPredicted RBP16.96■□□□□ 0.3
ZNF554-201ENST00000317243 PHYHD1Q5SRE7 291 aa16.96■□□□□ 0.3
ZNF554-201ENST00000317243 RPUSD3Q6P087 351 aaKnown RBP16.96■□□□□ 0.3
ZNF554-201ENST00000317243 BEND4Q6ZU67 534 aa16.96■□□□□ 0.3
ZNF554-201ENST00000317243 NPRL2Q8WTW4 380 aa16.96■□□□□ 0.3
ZNF554-201ENST00000317243 MISP3Q96FF7 219 aa16.96■□□□□ 0.3
ZNF554-201ENST00000317243 TMEM59Q9BXS4 323 aa16.96■□□□□ 0.3
ZNF554-201ENST00000317243 B3GALT5Q9Y2C3 310 aa16.96■□□□□ 0.3
ZNF554-201ENST00000317243 LSM5Q9Y4Y9 91 aaKnown RBP16.96■□□□□ 0.3
ZNF554-201ENST00000317243 CDC14BO60729 498 aa16.95■□□□□ 0.3
ZNF554-201ENST00000317243 PRH1P02810 166 aa16.95■□□□□ 0.3
ZNF554-201ENST00000317243 SOD3P08294 240 aa16.95■□□□□ 0.3
ZNF554-201ENST00000317243 FAM3AP98173 230 aa16.95■□□□□ 0.3
ZNF554-201ENST00000317243 OR13G1Q8NGZ3 307 aa16.95■□□□□ 0.3
ZNF554-201ENST00000317243 MRGPRX4Q96LA9 322 aa16.95■□□□□ 0.3
ZNF554-201ENST00000317243 NCKAP5O14513 1909 aa16.95■□□□□ 0.3
ZNF554-201ENST00000317243 ZNF726A6NNF4 738 aa16.95■□□□□ 0.3
ZNF554-201ENST00000317243 DEGS2Q6QHC5 323 aa16.95■□□□□ 0.3
ZNF554-201ENST00000317243 NTNG2Q96CW9 530 aa16.95■□□□□ 0.3
ZNF554-201ENST00000317243 SUCNR1Q9BXA5 334 aa16.95■□□□□ 0.3
ZNF554-201ENST00000317243 KLF7O75840 302 aaPredicted RBP16.94■□□□□ 0.3
ZNF554-201ENST00000317243 SCGNO76038 276 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 CHRM2P08172 466 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 QDPRP09417 244 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 PNLIPP16233 465 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 MAS1LP35410 378 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 CSNK2A1P68400 391 aaPredicted RBP16.94■□□□□ 0.3
ZNF554-201ENST00000317243 ZNF610Q8N9Z0 462 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 CSNK2A3Q8NEV1 391 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 LURAP1Q96LR2 239 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 RARRES2Q99969 163 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 EHFQ9NZC4 300 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 HS3ST3B1Q9Y662 390 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 A0A0G2JMM0 328 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 A0A1W2PPB8 328 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 A0A1W2PRS3 328 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 KIR3DP1A8MWS1 328 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 SCGB1D2O95969 90 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 GAPDHP04406 335 aaKnown RBP16.94■□□□□ 0.3
ZNF554-201ENST00000317243 CXCL1P09341 107 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 CEBPGP53567 150 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 RAB1AP62820 205 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 KHDC3LQ587J8 217 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 MAML2Q8IZL2 1156 aaPredicted RBP16.94■□□□□ 0.3
ZNF554-201ENST00000317243 RNASE11Q8TAA1 199 aaKnown RBP16.94■□□□□ 0.3
ZNF554-201ENST00000317243 MUCL1Q96DR8 90 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 S100A13Q99584 98 aa16.94■□□□□ 0.3
ZNF554-201ENST00000317243 HIST1H2BKO60814 126 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 HIST1H2BJP06899 126 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 DANCRP0C864 163 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 HIST1H2BOP23527 126 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 HIST1H2BBP33778 126 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 CLDN17P56750 224 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 HIST1H2BDP58876 126 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 HIST1H2BCP62807 126 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 HIST2H2BEQ16778 126 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 SOHLH1Q5JUK2 328 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.93■□□□□ 0.3
ZNF554-201ENST00000317243 OPN5Q6U736 354 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 NOXO1Q8NFA2 376 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 HIST1H2BHQ93079 126 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 ZNF837Q96EG3 531 aaPredicted RBP16.93■□□□□ 0.3
ZNF554-201ENST00000317243 HIST1H2BNQ99877 126 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 HIST1H2BMQ99879 126 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 PROK2Q9HC23 129 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 ZNF160Q9HCG1 818 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 C19orf12Q9NSK7 152 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 DCAF16Q9NXF7 216 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 MEMO1Q9Y316 297 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 B3GALT1Q9Y5Z6 326 aa16.93■□□□□ 0.3
ZNF554-201ENST00000317243 SNU13P55769 128 aaKnown RBP16.93■□□□□ 0.3
ZNF554-201ENST00000317243 SUMO3P55854 103 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms