RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 ACTBP60709 375 aa19.13■□□□□ 0.65
IRF3-201ENST00000309877 ACTG1P63261 375 aa19.13■□□□□ 0.65
IRF3-201ENST00000309877 SSBP1Q04837 148 aaKnown RBP19.13■□□□□ 0.65
IRF3-201ENST00000309877 DYRK1AQ13627 763 aa19.13■□□□□ 0.65
IRF3-201ENST00000309877 PCGF3Q3KNV8 242 aa19.13■□□□□ 0.65
IRF3-201ENST00000309877 PRAMEF6Q5VXH4 476 aa19.13■□□□□ 0.65
IRF3-201ENST00000309877 TRAPPC6BQ86SZ2 158 aa19.13■□□□□ 0.65
IRF3-201ENST00000309877 DMRTC2Q8IXT2 367 aaPredicted RBP19.13■□□□□ 0.65
IRF3-201ENST00000309877 Q8IYB0 196 aa19.13■□□□□ 0.65
IRF3-201ENST00000309877 NPDC1Q9NQX5 325 aaPredicted RBP19.13■□□□□ 0.65
IRF3-201ENST00000309877 KCNK7Q9Y2U2 307 aa19.13■□□□□ 0.65
IRF3-201ENST00000309877 RNF115Q9Y4L5 304 aa19.13■□□□□ 0.65
IRF3-201ENST00000309877 ANKRD20A5PA0PJZ0 165 aa19.12■□□□□ 0.65
IRF3-201ENST00000309877 PRSS44E7EML9 344 aa19.12■□□□□ 0.65
IRF3-201ENST00000309877 CSF1P09603 554 aa19.12■□□□□ 0.65
IRF3-201ENST00000309877 CD200P41217 278 aa19.12■□□□□ 0.65
IRF3-201ENST00000309877 RFX2P48378 723 aa19.12■□□□□ 0.65
IRF3-201ENST00000309877 ARFRP1Q13795 201 aa19.12■□□□□ 0.65
IRF3-201ENST00000309877 FAM58AQ8N1B3 248 aa19.12■□□□□ 0.65
IRF3-201ENST00000309877 ENKURQ8TC29 256 aa19.12■□□□□ 0.65
IRF3-201ENST00000309877 NUDCD2Q8WVJ2 157 aa19.12■□□□□ 0.65
IRF3-201ENST00000309877 EMG1Q92979 244 aaKnown RBP19.12■□□□□ 0.65
IRF3-201ENST00000309877 C7orf50Q9BRJ6 194 aaKnown RBP19.12■□□□□ 0.65
IRF3-201ENST00000309877 CADP27708 2225 aa19.12■□□□□ 0.65
IRF3-201ENST00000309877 FAM90A10PA6NDY2 464 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 FAM90A18PA6NE21 464 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 FAM90A16PA6NEW6 464 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 FAM90A20PA6NIJ5 464 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 FAM90A8PA6NJQ4 464 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 FAM90A7PA6NKC0 464 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 SERPINE3A8MV23 424 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 FAM90A22PA8MWA6 464 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 FAM90A12PA8MX19 464 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 FAM90A5PA8MXJ8 464 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 FAM90A23PA8MXZ1 464 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 SSX4O60224 188 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 FAM90A15PP0C7V4 464 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 FAM90A13PP0C7W8 464 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 FAM90A14PP0C7W9 464 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 FAM90A24PP0C7X0 464 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 SPNP16150 400 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 NHLRC3Q5JS37 347 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 OLFML2AQ68BL7 652 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 C6orf201Q7Z4U5 140 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 TLNRD1Q9H1K6 362 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.11■□□□□ 0.65
IRF3-201ENST00000309877 UFSP2Q9NUQ7 469 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 FAM240BA0A1B0GVZ2 78 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 E7EQL1 145 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 OR7C1O76099 320 aaPredicted RBP19.11■□□□□ 0.65
IRF3-201ENST00000309877 PGA5P0DJD9 388 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 SERPINF1P36955 418 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 PDCD1Q15116 288 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 SIGIRRQ6IA17 410 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 CCBE1Q6UXH8 406 aaPredicted RBP19.11■□□□□ 0.65
IRF3-201ENST00000309877 HS3ST6Q96QI5 342 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 ZDHHC8Q9ULC8 765 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 HSF4Q9ULV5 492 aa19.11■□□□□ 0.65
IRF3-201ENST00000309877 DIDO1Q9BTC0 2240 aaKnown RBP19.11■□□□□ 0.65
IRF3-201ENST00000309877 FCER2P06734 321 aa19.1■□□□□ 0.65
IRF3-201ENST00000309877 TNFSF4P23510 183 aa19.1■□□□□ 0.65
IRF3-201ENST00000309877 CHATP28329 748 aa19.1■□□□□ 0.65
IRF3-201ENST00000309877 KIR2DL3P43628 341 aa19.1■□□□□ 0.65
IRF3-201ENST00000309877 MPPED2Q15777 294 aa19.1■□□□□ 0.65
IRF3-201ENST00000309877 C11orf53Q8IXP5 236 aa19.1■□□□□ 0.65
IRF3-201ENST00000309877 ST8SIA4Q92187 359 aa19.1■□□□□ 0.65
IRF3-201ENST00000309877 NEUROG1Q92886 237 aa19.1■□□□□ 0.65
IRF3-201ENST00000309877 PIK3IP1Q96FE7 263 aa19.1■□□□□ 0.65
IRF3-201ENST00000309877 OR2V2Q96R30 315 aa19.1■□□□□ 0.65
IRF3-201ENST00000309877 IFT46Q9NQC8 304 aa19.1■□□□□ 0.65
IRF3-201ENST00000309877 hCG_1807616A0A1W2PRN6 198 aa19.09■□□□□ 0.65
IRF3-201ENST00000309877 PDCD6O75340 191 aa19.09■□□□□ 0.65
IRF3-201ENST00000309877 NXPH2O95156 264 aa19.09■□□□□ 0.65
IRF3-201ENST00000309877 ACAA1P09110 424 aaPredicted RBP19.09■□□□□ 0.65
IRF3-201ENST00000309877 FUT3P21217 361 aa19.09■□□□□ 0.65
IRF3-201ENST00000309877 MPV17LQ2QL34 196 aa19.09■□□□□ 0.65
IRF3-201ENST00000309877 ATAD3CQ5T2N8 411 aa19.09■□□□□ 0.65
IRF3-201ENST00000309877 ZNF826PQ6ZT77 177 aa19.09■□□□□ 0.65
IRF3-201ENST00000309877 LINC00596Q86U02 117 aa19.09■□□□□ 0.65
IRF3-201ENST00000309877 CELF2-AS1Q8N7Q2 184 aa19.09■□□□□ 0.65
IRF3-201ENST00000309877 MEGF10Q96KG7 1140 aa19.09■□□□□ 0.65
IRF3-201ENST00000309877 NRIP2Q9BQI9 281 aa19.09■□□□□ 0.65
IRF3-201ENST00000309877 FAAP24Q9BTP7 215 aa19.09■□□□□ 0.65
IRF3-201ENST00000309877 HRASLSQ9HDD0 168 aa19.09■□□□□ 0.65
IRF3-201ENST00000309877 C1orf123Q9NWV4 160 aa19.09■□□□□ 0.65
IRF3-201ENST00000309877 ZNF581Q9P0T4 197 aa19.09■□□□□ 0.65
IRF3-201ENST00000309877 IL36RNQ9UBH0 155 aa19.09■□□□□ 0.65
IRF3-201ENST00000309877 hCG_2014768A0A024R1R8 64 aa19.08■□□□□ 0.65
IRF3-201ENST00000309877 H3BUI4 141 aa19.08■□□□□ 0.65
IRF3-201ENST00000309877 SIAH2O43255 324 aa19.08■□□□□ 0.65
IRF3-201ENST00000309877 SSX5O60225 188 aa19.08■□□□□ 0.65
IRF3-201ENST00000309877 MT-ND4P03905 459 aa19.08■□□□□ 0.65
IRF3-201ENST00000309877 APOBEC3AP31941 199 aaPredicted RBP19.08■□□□□ 0.65
IRF3-201ENST00000309877 RCVRNP35243 200 aa19.08■□□□□ 0.65
IRF3-201ENST00000309877 GMFBP60983 142 aa19.08■□□□□ 0.65
IRF3-201ENST00000309877 ERVK11-1P61568 191 aa19.08■□□□□ 0.65
IRF3-201ENST00000309877 IKZF1Q13422 519 aa19.08■□□□□ 0.65
IRF3-201ENST00000309877 IL13RA2Q14627 380 aa19.08■□□□□ 0.65
IRF3-201ENST00000309877 POC1AQ8NBT0 407 aa19.08■□□□□ 0.65
IRF3-201ENST00000309877 NAP1L6A6NFF2 107 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms