RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 ACTBL2Q562R1 376 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 SIGIRRQ6IA17 410 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 Q8NA96 180 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 OR5H2Q8NGV7 314 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 TERB2Q8NHR7 220 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 TECTBQ96PL2 329 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 FXYD6-FXYD2A0A087WZ82 144 aa19.27■□□□□ 0.68
PDLIM2-202ENST00000308354 ARPC5O15511 151 aa19.27■□□□□ 0.68
PDLIM2-202ENST00000308354 RGS11O94810 467 aa19.27■□□□□ 0.68
PDLIM2-202ENST00000308354 HAAOP46952 286 aa19.27■□□□□ 0.68
PDLIM2-202ENST00000308354 SNU13P55769 128 aaKnown RBP19.27■□□□□ 0.68
PDLIM2-202ENST00000308354 SEC61A1P61619 476 aaKnown RBP19.27■□□□□ 0.68
PDLIM2-202ENST00000308354 BRICD5Q6PL45 260 aa19.27■□□□□ 0.68
PDLIM2-202ENST00000308354 ASCL4Q6XD76 172 aa19.27■□□□□ 0.68
PDLIM2-202ENST00000308354 FBXL14Q8N1E6 418 aa19.27■□□□□ 0.68
PDLIM2-202ENST00000308354 CSNK2A3Q8NEV1 391 aa19.27■□□□□ 0.68
PDLIM2-202ENST00000308354 OR5L1Q8NGL2 311 aa19.27■□□□□ 0.68
PDLIM2-202ENST00000308354 OR2J1Q9GZK6 312 aa19.27■□□□□ 0.68
PDLIM2-202ENST00000308354 FXYD6Q9H0Q3 95 aa19.27■□□□□ 0.68
PDLIM2-202ENST00000308354 PLEKHJ1Q9NW61 149 aa19.27■□□□□ 0.68
PDLIM2-202ENST00000308354 PQLC2LA1A4F0 135 aa19.27■□□□□ 0.67
PDLIM2-202ENST00000308354 C9orf170A2RU37 121 aa19.27■□□□□ 0.67
PDLIM2-202ENST00000308354 FIGNL2A6NMB9 653 aa19.27■□□□□ 0.67
PDLIM2-202ENST00000308354 MCRIP1C9JLW8 97 aa19.27■□□□□ 0.67
PDLIM2-202ENST00000308354 L7N2F9 121 aa19.27■□□□□ 0.67
PDLIM2-202ENST00000308354 GEMIN2O14893 280 aaKnown RBP19.27■□□□□ 0.67
PDLIM2-202ENST00000308354 SMPD2O60906 423 aa19.27■□□□□ 0.67
PDLIM2-202ENST00000308354 CST4P01036 141 aa19.27■□□□□ 0.67
PDLIM2-202ENST00000308354 OPCMLQ14982 345 aa19.27■□□□□ 0.67
PDLIM2-202ENST00000308354 CEACAM21Q3KPI0 293 aa19.27■□□□□ 0.67
PDLIM2-202ENST00000308354 C1orf185Q5T7R7 199 aa19.27■□□□□ 0.67
PDLIM2-202ENST00000308354 LIN54Q6MZP7 749 aa19.27■□□□□ 0.67
PDLIM2-202ENST00000308354 CCDC36Q8IYA8 594 aa19.27■□□□□ 0.67
PDLIM2-202ENST00000308354 ARRDC1Q8N5I2 433 aa19.27■□□□□ 0.67
PDLIM2-202ENST00000308354 ZNF732B4DXR9 585 aa19.26■□□□□ 0.67
PDLIM2-202ENST00000308354 NOS1APO75052 506 aaPredicted RBP19.26■□□□□ 0.67
PDLIM2-202ENST00000308354 CFDP00746 253 aaPredicted RBP19.26■□□□□ 0.67
PDLIM2-202ENST00000308354 IL2RAP01589 272 aa19.26■□□□□ 0.67
PDLIM2-202ENST00000308354 FAM87AP0C7U9 286 aa19.26■□□□□ 0.67
PDLIM2-202ENST00000308354 VAMP1P23763 118 aa19.26■□□□□ 0.67
PDLIM2-202ENST00000308354 NPY4RP50391 375 aa19.26■□□□□ 0.67
PDLIM2-202ENST00000308354 IL13RA1P78552 427 aa19.26■□□□□ 0.67
PDLIM2-202ENST00000308354 OR8H3Q8N146 312 aa19.26■□□□□ 0.67
PDLIM2-202ENST00000308354 OR5M8Q8NGP6 311 aa19.26■□□□□ 0.67
PDLIM2-202ENST00000308354 HDHD3Q9BSH5 251 aaPredicted RBP19.26■□□□□ 0.67
PDLIM2-202ENST00000308354 RAXQ9Y2V3 346 aa19.26■□□□□ 0.67
PDLIM2-202ENST00000308354 SDCBPO00560 298 aaPredicted RBP19.25■□□□□ 0.67
PDLIM2-202ENST00000308354 CCSO14618 274 aa19.25■□□□□ 0.67
PDLIM2-202ENST00000308354 SORDQ00796 357 aa19.25■□□□□ 0.67
PDLIM2-202ENST00000308354 EXOSC2Q13868 293 aaKnown RBP19.25■□□□□ 0.67
PDLIM2-202ENST00000308354 KRTCAP3Q53RY4 240 aa19.25■□□□□ 0.67
PDLIM2-202ENST00000308354 OSR2Q8N2R0 312 aa19.25■□□□□ 0.67
PDLIM2-202ENST00000308354 ZNF701Q9NV72 531 aaPredicted RBP19.25■□□□□ 0.67
PDLIM2-202ENST00000308354 CA6P23280 308 aa19.25■□□□□ 0.67
PDLIM2-202ENST00000308354 PPP1CBP62140 327 aa19.25■□□□□ 0.67
PDLIM2-202ENST00000308354 MRPL49Q13405 166 aaKnown RBP19.25■□□□□ 0.67
PDLIM2-202ENST00000308354 ALKBH2Q6NS38 261 aa19.25■□□□□ 0.67
PDLIM2-202ENST00000308354 PXT1Q8NFP0 134 aa19.25■□□□□ 0.67
PDLIM2-202ENST00000308354 CASTOR1Q8WTX7 329 aa19.25■□□□□ 0.67
PDLIM2-202ENST00000308354 SLAMF9Q96A28 289 aa19.25■□□□□ 0.67
PDLIM2-202ENST00000308354 FAAP24Q9BTP7 215 aa19.25■□□□□ 0.67
PDLIM2-202ENST00000308354 ST3GAL6Q9Y274 331 aa19.25■□□□□ 0.67
PDLIM2-202ENST00000308354 ANKRD30BLA7E2S9 258 aa19.24■□□□□ 0.67
PDLIM2-202ENST00000308354 PPP3CBP16298 524 aa19.24■□□□□ 0.67
PDLIM2-202ENST00000308354 OR3A3P47888 321 aa19.24■□□□□ 0.67
PDLIM2-202ENST00000308354 ZNF324BQ6AW86 544 aaPredicted RBP19.24■□□□□ 0.67
PDLIM2-202ENST00000308354 FAHD2BQ6P2I3 314 aaPredicted RBP19.24■□□□□ 0.67
PDLIM2-202ENST00000308354 MITD1Q8WV92 249 aa19.24■□□□□ 0.67
PDLIM2-202ENST00000308354 FAHD2AQ96GK7 314 aa19.24■□□□□ 0.67
PDLIM2-202ENST00000308354 OPA3Q9H6K4 179 aa19.24■□□□□ 0.67
PDLIM2-202ENST00000308354 HMSDA8MTL9 139 aa19.24■□□□□ 0.67
PDLIM2-202ENST00000308354 F8VVB4 439 aa19.24■□□□□ 0.67
PDLIM2-202ENST00000308354 F8VWA3 439 aa19.24■□□□□ 0.67
PDLIM2-202ENST00000308354 CBR1P16152 277 aa19.24■□□□□ 0.67
PDLIM2-202ENST00000308354 ARL6IP1Q15041 203 aa19.24■□□□□ 0.67
PDLIM2-202ENST00000308354 OR13G1Q8NGZ3 307 aa19.24■□□□□ 0.67
PDLIM2-202ENST00000308354 FAM57AQ8TBR7 257 aa19.24■□□□□ 0.67
PDLIM2-202ENST00000308354 ASB13Q8WXK3 278 aa19.24■□□□□ 0.67
PDLIM2-202ENST00000308354 DYRK2Q92630 601 aa19.24■□□□□ 0.67
PDLIM2-202ENST00000308354 HIST1H2AAQ96QV6 131 aa19.24■□□□□ 0.67
PDLIM2-202ENST00000308354 IGKV1D-8A0A087WSZ0 117 aa19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 IGKV3-15P01624 115 aa19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 TAS2R46P59540 309 aa19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 ALKBH6Q3KRA9 238 aa19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 C1orf162Q8NEQ5 155 aaPredicted RBP19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 OR1J1Q8NGS3 322 aa19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 SLC25A40Q8TBP6 338 aa19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 EMG1Q92979 244 aaKnown RBP19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 HS3ST6Q96QI5 342 aa19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 PHB2Q99623 299 aa19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 C5orf66Q9H5L9 145 aa19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 EHFQ9NZC4 300 aa19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 TRAV14DV4A0A0A6YYC5 116 aa19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 C3orf80F5H4A9 247 aa19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 IFNA7P01567 189 aa19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 BCL3P20749 454 aa19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 UCP2P55851 309 aa19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 BAMBIQ13145 260 aa19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 PRR30Q53SZ7 412 aaPredicted RBP19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 ZNF474Q6S9Z5 364 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms