RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 RNF144BQ7Z419 303 aa17.11■□□□□ 0.33
MRPL39-201ENST00000307301 TSEN15Q8WW01 171 aaKnown RBP17.11■□□□□ 0.33
MRPL39-201ENST00000307301 GATAD2BQ8WXI9 593 aa17.11■□□□□ 0.33
MRPL39-201ENST00000307301 GGHQ92820 318 aa17.11■□□□□ 0.33
MRPL39-201ENST00000307301 RFT1Q96AA3 541 aa17.11■□□□□ 0.33
MRPL39-201ENST00000307301 SPSB1Q96BD6 273 aa17.11■□□□□ 0.33
MRPL39-201ENST00000307301 TMEM80Q96HE8 168 aa17.11■□□□□ 0.33
MRPL39-201ENST00000307301 SPACA5Q96QH8 159 aa17.11■□□□□ 0.33
MRPL39-201ENST00000307301 ZCCHC4Q9H5U6 513 aa17.11■□□□□ 0.33
MRPL39-201ENST00000307301 CLEC2DQ9UHP7 191 aa17.11■□□□□ 0.33
MRPL39-201ENST00000307301 EXOSC1Q9Y3B2 195 aaKnown RBP17.11■□□□□ 0.33
MRPL39-201ENST00000307301 SPRY1O43609 319 aaPredicted RBP17.1■□□□□ 0.33
MRPL39-201ENST00000307301 RPSAP08865 295 aaKnown RBP17.1■□□□□ 0.33
MRPL39-201ENST00000307301 PRTN3P24158 256 aa17.1■□□□□ 0.33
MRPL39-201ENST00000307301 MKXQ8IYA7 352 aa17.1■□□□□ 0.33
MRPL39-201ENST00000307301 FAM185AQ8N0U4 392 aa17.1■□□□□ 0.33
MRPL39-201ENST00000307301 RGP1Q92546 391 aaPredicted RBP17.1■□□□□ 0.33
MRPL39-201ENST00000307301 EMG1Q92979 244 aaKnown RBP17.1■□□□□ 0.33
MRPL39-201ENST00000307301 C19orf12Q9NSK7 152 aa17.1■□□□□ 0.33
MRPL39-201ENST00000307301 DHDHQ9UQ10 334 aa17.1■□□□□ 0.33
MRPL39-201ENST00000307301 TRBV23-1A0A0A0MS06 115 aa17.09■□□□□ 0.33
MRPL39-201ENST00000307301 CYB5AP00167 134 aa17.09■□□□□ 0.33
MRPL39-201ENST00000307301 MT-ND2P03891 347 aa17.09■□□□□ 0.33
MRPL39-201ENST00000307301 BCL3P20749 454 aa17.09■□□□□ 0.33
MRPL39-201ENST00000307301 NPBWR2P48146 333 aa17.09■□□□□ 0.33
MRPL39-201ENST00000307301 COL10A1Q03692 680 aa17.09■□□□□ 0.33
MRPL39-201ENST00000307301 CDK5R1Q15078 307 aa17.09■□□□□ 0.33
MRPL39-201ENST00000307301 SLC9A3R2Q15599 337 aa17.09■□□□□ 0.33
MRPL39-201ENST00000307301 CCDC58Q4VC31 144 aa17.09■□□□□ 0.33
MRPL39-201ENST00000307301 RPL22L1Q6P5R6 122 aaKnown RBP17.09■□□□□ 0.33
MRPL39-201ENST00000307301 SERPINA12Q8IW75 414 aa17.09■□□□□ 0.33
MRPL39-201ENST00000307301 PARP16Q8N5Y8 322 aa17.09■□□□□ 0.33
MRPL39-201ENST00000307301 RPS4Y2Q8TD47 263 aa17.09■□□□□ 0.33
MRPL39-201ENST00000307301 FBLIM1Q8WUP2 373 aa17.09■□□□□ 0.33
MRPL39-201ENST00000307301 NRG4Q8WWG1 115 aa17.09■□□□□ 0.33
MRPL39-201ENST00000307301 ZDHHC16Q969W1 377 aa17.09■□□□□ 0.33
MRPL39-201ENST00000307301 PRDM13Q9H4Q3 707 aa17.09■□□□□ 0.33
MRPL39-201ENST00000307301 RBFOX1Q9NWB1 397 aaKnown RBP17.09■□□□□ 0.33
MRPL39-201ENST00000307301 IL36RNQ9UBH0 155 aa17.09■□□□□ 0.33
MRPL39-201ENST00000307301 SIRT4Q9Y6E7 314 aaPredicted RBP17.09■□□□□ 0.33
MRPL39-201ENST00000307301 RNASEK-C17orf49H0YIS7 233 aa17.08■□□□□ 0.32
MRPL39-201ENST00000307301 M0R1W7 72 aa17.08■□□□□ 0.32
MRPL39-201ENST00000307301 XPNPEP2O43895 674 aa17.08■□□□□ 0.32
MRPL39-201ENST00000307301 TK1P04183 234 aa17.08■□□□□ 0.32
MRPL39-201ENST00000307301 CALCBP10092 127 aa17.08■□□□□ 0.32
MRPL39-201ENST00000307301 ST3GAL4Q11206 333 aa17.08■□□□□ 0.32
MRPL39-201ENST00000307301 PDZK1IP1Q13113 114 aa17.08■□□□□ 0.32
MRPL39-201ENST00000307301 KLRD1Q13241 179 aa17.08■□□□□ 0.32
MRPL39-201ENST00000307301 CRIP3Q6Q6R5 217 aa17.08■□□□□ 0.32
MRPL39-201ENST00000307301 METAP1DQ6UB28 335 aaPredicted RBP17.08■□□□□ 0.32
MRPL39-201ENST00000307301 Q8IYB0 196 aa17.08■□□□□ 0.32
MRPL39-201ENST00000307301 ASCC1Q8N9N2 400 aaKnown RBP17.08■□□□□ 0.32
MRPL39-201ENST00000307301 OR4M1Q8NGD0 313 aa17.08■□□□□ 0.32
MRPL39-201ENST00000307301 OR5D18Q8NGL1 313 aa17.08■□□□□ 0.32
MRPL39-201ENST00000307301 OR5D14Q8NGL3 314 aa17.08■□□□□ 0.32
MRPL39-201ENST00000307301 TFAP2CQ92754 450 aa17.08■□□□□ 0.32
MRPL39-201ENST00000307301 GCDHQ92947 438 aaPredicted RBP17.08■□□□□ 0.32
MRPL39-201ENST00000307301 ZMAT3Q9HA38 289 aaKnown RBP17.08■□□□□ 0.32
MRPL39-201ENST00000307301 BABAM2Q9NXR7 383 aa17.08■□□□□ 0.32
MRPL39-201ENST00000307301 IGKV1-12A0A0C4DH73 117 aa17.07■□□□□ 0.32
MRPL39-201ENST00000307301 TMEM89A2RUT3 159 aa17.07■□□□□ 0.32
MRPL39-201ENST00000307301 EFCAB10A6NFE3 127 aa17.07■□□□□ 0.32
MRPL39-201ENST00000307301 K7N7A8 449 aa17.07■□□□□ 0.32
MRPL39-201ENST00000307301 HOXA3O43365 443 aaPredicted RBP17.07■□□□□ 0.32
MRPL39-201ENST00000307301 SULT1B1O43704 296 aa17.07■□□□□ 0.32
MRPL39-201ENST00000307301 ANGPTL7O43827 346 aa17.07■□□□□ 0.32
MRPL39-201ENST00000307301 LALBAP00709 142 aa17.07■□□□□ 0.32
MRPL39-201ENST00000307301 IGKV1D-12P01611 117 aa17.07■□□□□ 0.32
MRPL39-201ENST00000307301 CHRM2P08172 466 aa17.07■□□□□ 0.32
MRPL39-201ENST00000307301 HCKP08631 526 aa17.07■□□□□ 0.32
MRPL39-201ENST00000307301 PIPP12273 146 aaPredicted RBP17.07■□□□□ 0.32
MRPL39-201ENST00000307301 SOX2P48431 317 aa17.07■□□□□ 0.32
MRPL39-201ENST00000307301 RPL31P62899 125 aaKnown RBP17.07■□□□□ 0.32
MRPL39-201ENST00000307301 MED21Q13503 144 aa17.07■□□□□ 0.32
MRPL39-201ENST00000307301 C1orf122Q6ZSJ8 110 aa17.07■□□□□ 0.32
MRPL39-201ENST00000307301 FAM58AQ8N1B3 248 aa17.07■□□□□ 0.32
MRPL39-201ENST00000307301 OR52N1Q8NH53 320 aa17.07■□□□□ 0.32
MRPL39-201ENST00000307301 TNFRSF14Q92956 283 aa17.07■□□□□ 0.32
MRPL39-201ENST00000307301 SLC25A28Q96A46 364 aa17.07■□□□□ 0.32
MRPL39-201ENST00000307301 FAM234AQ9H0X4 552 aa17.07■□□□□ 0.32
MRPL39-201ENST00000307301 CHCHD3Q9NX63 227 aaKnown RBP17.07■□□□□ 0.32
MRPL39-201ENST00000307301 CNOT2Q9NZN8 540 aaKnown RBP17.07■□□□□ 0.32
MRPL39-201ENST00000307301 DSCAML1Q8TD84 2053 aa17.07■□□□□ 0.32
MRPL39-201ENST00000307301 A0A0U1RQK1 487 aa17.06■□□□□ 0.32
MRPL39-201ENST00000307301 CLDN34H7C241 214 aa17.06■□□□□ 0.32
MRPL39-201ENST00000307301 OGG1O15527 345 aa17.06■□□□□ 0.32
MRPL39-201ENST00000307301 ZNF737O75373 536 aa17.06■□□□□ 0.32
MRPL39-201ENST00000307301 RNASE1P07998 156 aaKnown RBP17.06■□□□□ 0.32
MRPL39-201ENST00000307301 PRKACAP17612 351 aa17.06■□□□□ 0.32
MRPL39-201ENST00000307301 DUSP1P28562 367 aa17.06■□□□□ 0.32
MRPL39-201ENST00000307301 SNU13P55769 128 aaKnown RBP17.06■□□□□ 0.32
MRPL39-201ENST00000307301 BLMHQ13867 455 aa17.06■□□□□ 0.32
MRPL39-201ENST00000307301 TMEM200BQ69YZ2 307 aa17.06■□□□□ 0.32
MRPL39-201ENST00000307301 C12orf54Q6X4T0 127 aa17.06■□□□□ 0.32
MRPL39-201ENST00000307301 Q6YL49 198 aa17.06■□□□□ 0.32
MRPL39-201ENST00000307301 AHSA2Q719I0 299 aa17.06■□□□□ 0.32
MRPL39-201ENST00000307301 ZNF485Q8NCK3 441 aa17.06■□□□□ 0.32
MRPL39-201ENST00000307301 BPIFB6Q8NFQ5 453 aa17.06■□□□□ 0.32
MRPL39-201ENST00000307301 GPR148Q8TDV2 347 aa17.06■□□□□ 0.32
MRPL39-201ENST00000307301 METTL8Q9H825 291 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms