RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ABCA4P78363 2273 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 GBF1Q92538 1859 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 DEFB108AA8MXU0 73 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 NUDT19A8MXV4 375 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 IL7P13232 177 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 ELK1P19419 428 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 CD80P33681 288 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 BSPH1Q075Z2 132 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 ACSM1Q08AH1 577 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 TESK1Q15569 626 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 SLC25A53Q5H9E4 307 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 MDS2Q8NDY4 140 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 RAB18Q9NP72 206 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 CYB5R1Q9UHQ9 305 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 FBXO7Q9Y3I1 522 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 IGHV3OR15-7A0A075B7D8 119 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 A8MV72 311 aaPredicted RBP8.05□□□□□ -1.12
PTPRE-202ENST00000306042 M0R1X1 148 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 YIF1AO95070 293 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 NAT2P11245 290 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 NFYAP23511 347 aaPredicted RBP8.05□□□□□ -1.12
PTPRE-202ENST00000306042 GZMKP49863 264 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 RAB7AP51149 207 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 VMA21Q3ZAQ7 101 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 CORO2AQ92828 525 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 ARL6Q9H0F7 186 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 RANBP3Q9H6Z4 567 aaPredicted RBP8.05□□□□□ -1.12
PTPRE-202ENST00000306042 METTL17Q9H7H0 456 aaPredicted RBP8.05□□□□□ -1.12
PTPRE-202ENST00000306042 IGLV3-32A0A0A0MS00 114 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 NPIPB13A6NJU9 1138 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 NPIPB4C9JG80 1138 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 MAGEB1P43366 347 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 FXNQ16595 210 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 SIAH3Q8IW03 269 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 OR8G5Q8NG78 346 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 OR8U1Q8NH10 309 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 KLF14Q8TD94 323 aaPredicted RBP8.05□□□□□ -1.12
PTPRE-202ENST00000306042 FRRS1LQ9P0K9 344 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 SLC25A10Q9UBX3 287 aaPredicted RBP8.05□□□□□ -1.12
PTPRE-202ENST00000306042 HSPB11Q9Y547 144 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 CSAG2Q9Y5P2 127 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 RP2O75695 350 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 GLI4P10075 376 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 TIMP3P35625 211 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 GLRXP35754 106 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 RPL11P62913 178 aaKnown RBP8.05□□□□□ -1.12
PTPRE-202ENST00000306042 RBMXL3Q8N7X1 1067 aaKnown RBP8.05□□□□□ -1.12
PTPRE-202ENST00000306042 OR13D1Q8NGV5 346 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 OR52I2Q8NH67 350 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 OR56B4Q8NH76 319 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 CHST5Q9GZS9 411 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 MMP28Q9H239 520 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 IL19Q9UHD0 177 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 ZNF318Q5VUA4 2279 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 C2orf16Q68DN1 1984 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 POLEQ07864 2286 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 B8ZZF3 427 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 DCTN6O00399 190 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 FABP7O15540 132 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 IFNA7P01567 189 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 AKR1C8PQ5T2L2 129 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 GPR157Q5UAW9 335 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 SHEQ5VZ18 495 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 PDZD9Q8IXQ8 264 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 SDSLQ96GA7 329 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 OR51J1Q9H342 316 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 RNF24Q9Y225 148 aa8.05□□□□□ -1.12
PTPRE-202ENST00000306042 IGLV1-36A0A0B4J1U3 117 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 RFPL4AA6NLU0 287 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 RFPL4AL1F8VTS6 287 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 SS18L1O75177 396 aaPredicted RBP8.04□□□□□ -1.12
PTPRE-202ENST00000306042 CEACAM6P40199 344 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 OR3A1P47881 315 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 GFRA1P56159 465 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 RPL31P62899 125 aaKnown RBP8.04□□□□□ -1.12
PTPRE-202ENST00000306042 C20orf204Q6ZNR8 217 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 OR51S1Q8NGJ8 323 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 FAAP24Q9BTP7 215 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 CNTD2Q9H8S5 307 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 LPAR3Q9UBY5 353 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 A0A0U1RQV5 110 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 TNFSF12O43508 249 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 CECR9P0C854 216 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 DCTDP32321 178 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 ALDH3B2P48448 385 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 HNF4GQ14541 408 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 C10orf128Q5T292 105 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 STUMQ69YW2 141 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 GLCCI1Q86VQ1 547 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 OR2T35Q8NGX2 323 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 TMEM54Q969K7 222 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 PSG11Q9UQ72 335 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 ROS1P08922 2347 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 IGHV3-43A0A0B4J1X8 118 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 OR4C45A6NMZ5 311 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 NDUFA2O43678 99 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 IGHV3-43DP0DP04 118 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 BCL3P20749 454 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 IGHV1-2P23083 117 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 BRICD5Q6PL45 260 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms