RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 ACSF3Q4G176 576 aaPredicted RBP5.62□□□□□ -1.51
USP47-201ENST00000305481 SPATA46Q5T0L3 261 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 FAHD2BQ6P2I3 314 aaPredicted RBP5.62□□□□□ -1.51
USP47-201ENST00000305481 Q6ZT83 130 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 SEM1Q6ZVN7 128 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 ZADH2Q8N4Q0 377 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 OR5M8Q8NGP6 311 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 FAHD2AQ96GK7 314 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 EHFQ9NZC4 300 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 MTCH1Q9NZJ7 389 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 TRAV14DV4A0A0A6YYC5 116 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 C3orf80F5H4A9 247 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 CCSO14618 274 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 KLK10O43240 276 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 NFYAP23511 347 aaPredicted RBP5.61□□□□□ -1.51
USP47-201ENST00000305481 CD34P28906 385 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 HTR2BP41595 481 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 OR3A3P47888 321 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 SUPT4H1P63272 117 aaKnown RBP5.61□□□□□ -1.51
USP47-201ENST00000305481 SRSF4Q08170 494 aaKnown RBP5.61□□□□□ -1.51
USP47-201ENST00000305481 GRK1Q15835 563 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 ZNF660Q6AZW8 331 aaPredicted RBP5.61□□□□□ -1.51
USP47-201ENST00000305481 ZDHHC23Q8IYP9 409 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 CNEP1R1Q8N9A8 125 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 ZNF680Q8NEM1 530 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 TMEM185AQ8NFB2 350 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 OR5P3Q8WZ94 311 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 WNT2BQ93097 391 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 SLAMF9Q96A28 289 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 SARAFQ96BY9 339 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 IL36RNQ9UBH0 155 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 FAM221AA4D161 298 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 DBX1A6NMT0 343 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 ZNF732B4DXR9 585 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 ERVH48-1M5A8F1 160 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 TNFSF13O75888 250 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 RGS11O94810 467 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 DUS4LO95620 317 aaKnown RBP5.61□□□□□ -1.51
USP47-201ENST00000305481 CFDP00746 253 aaPredicted RBP5.61□□□□□ -1.51
USP47-201ENST00000305481 FCGR3AP08637 254 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 PPP3CBP16298 524 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 HLA-GP17693 338 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 GLRA1P23415 457 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 IL32P24001 234 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 OPRM1P35372 400 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 CHRFAM7AQ494W8 412 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 RTL6Q6ICC9 239 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 OR2T2Q6IF00 324 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 C11orf88Q6PI97 169 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 OR8H1Q8NGG4 311 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 NANOS1Q8WY41 292 aaKnown RBP5.61□□□□□ -1.51
USP47-201ENST00000305481 ELMOD3Q96FG2 381 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 DPCDQ9BVM2 203 aaPredicted RBP5.61□□□□□ -1.51
USP47-201ENST00000305481 PPA2Q9H2U2 334 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 NOP16Q9Y3C1 178 aaKnown RBP5.61□□□□□ -1.51
USP47-201ENST00000305481 PRR14LQ5THK1 2151 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 PROB1E7EW31 1015 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 RRP8O43159 456 aaKnown RBP5.61□□□□□ -1.51
USP47-201ENST00000305481 ZNF205O95201 554 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 CD8AP01732 235 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 RPS2P15880 293 aaKnown RBP5.61□□□□□ -1.51
USP47-201ENST00000305481 COX5AP20674 150 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 VAMP1P23763 118 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 IDH3GP51553 393 aaPredicted RBP5.61□□□□□ -1.51
USP47-201ENST00000305481 ERVS71-1P61550 626 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 SEC61A1P61619 476 aaKnown RBP5.61□□□□□ -1.51
USP47-201ENST00000305481 SORDQ00796 357 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 TMEM128Q5BJH2 165 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 ELP2Q6IA86 826 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 Q6ZS92 163 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 ZNF767PQ75MW2 155 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 RBMXL3Q8N7X1 1067 aaKnown RBP5.61□□□□□ -1.51
USP47-201ENST00000305481 WDR31Q8NA23 367 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 OR5A2Q8NGI9 324 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 CASTOR1Q8WTX7 329 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 MARS2Q96GW9 593 aaKnown RBP5.61□□□□□ -1.51
USP47-201ENST00000305481 SEC22AQ96IW7 307 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 CMSS1Q9BQ75 279 aaKnown RBP5.61□□□□□ -1.51
USP47-201ENST00000305481 PRR13Q9NZ81 148 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 ANXA10Q9UJ72 324 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 SVILO95425 2214 aa5.61□□□□□ -1.51
USP47-201ENST00000305481 CEP295Q9C0D2 2601 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 HMSDA8MTL9 139 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 AHRRA9YTQ3 701 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 SYNGR1O43759 233 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 SMPD2O60906 423 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 PDCD6O75340 191 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 CNOT4O95628 575 aaKnown RBP5.6□□□□□ -1.51
USP47-201ENST00000305481 CA6P23280 308 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 S100A1P23297 94 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 FPR2P25090 351 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 TGFBR3Q03167 851 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 TBC1D28Q2M2D7 210 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 TMEM200AQ86VY9 491 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 SAXO1Q8IYX7 474 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 CCDC120Q96HB5 630 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 BOD1Q96IK1 185 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 MICU1Q9BPX6 476 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 C1QTNF6Q9BXI9 259 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 OPA3Q9H6K4 179 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms