RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 TUBG2Q9NRH3 451 aa13.1□□□□□ -0.31
SPIDR-201ENST00000297423 SPTBN1Q01082 2364 aaKnown RBP13.09□□□□□ -0.31
SPIDR-201ENST00000297423 SHISA7A6NL88 538 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 CEBPZOSA8MTT3 80 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 HSPB6O14558 160 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 SFTPDP35247 375 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 ERVFRD-1P60508 538 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 HGFACQ04756 655 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 MPV17LQ2QL34 196 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 ZNF66Q6ZN08 573 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 TSLPQ969D9 159 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 OR14J1Q9UGF5 321 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 KIAA2026Q5HYC2 2103 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 NSG1A0A0A6YYJ2 146 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 A0A0J9YY10 115 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 BPNT1O95861 308 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 FGF7P21781 194 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 SUPT4H1P63272 117 aaKnown RBP13.09□□□□□ -0.31
SPIDR-201ENST00000297423 ZNF117Q03924 483 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 PNLIPRP3Q17RR3 467 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 RBM14Q96PK6 669 aaKnown RBP13.09□□□□□ -0.31
SPIDR-201ENST00000297423 RTBDNQ9BSG5 229 aaPredicted RBP13.09□□□□□ -0.31
SPIDR-201ENST00000297423 LPAR5Q9H1C0 372 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 RBM7Q9Y580 266 aaKnown RBP13.09□□□□□ -0.31
SPIDR-201ENST00000297423 A0A1B0GTQ1 180 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 CDC14BO60729 498 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 MBPP02686 304 aaPredicted RBP13.09□□□□□ -0.31
SPIDR-201ENST00000297423 ZNF16P17020 682 aaPredicted RBP13.09□□□□□ -0.31
SPIDR-201ENST00000297423 RPS18P62269 152 aaKnown RBP13.09□□□□□ -0.31
SPIDR-201ENST00000297423 PMS2P11Q13670 270 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 OR14L1PQ8NHC6 308 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 SLC39A7Q92504 469 aa13.09□□□□□ -0.31
SPIDR-201ENST00000297423 WIPF3A6NGB9 483 aa13.08□□□□□ -0.31
SPIDR-201ENST00000297423 ASAH2BP0C7U1 165 aa13.08□□□□□ -0.31
SPIDR-201ENST00000297423 IL2RGP31785 369 aa13.08□□□□□ -0.31
SPIDR-201ENST00000297423 RND3P61587 244 aa13.08□□□□□ -0.31
SPIDR-201ENST00000297423 LSM6P62312 80 aaKnown RBP13.08□□□□□ -0.31
SPIDR-201ENST00000297423 HEPN1Q6WQI6 88 aa13.08□□□□□ -0.31
SPIDR-201ENST00000297423 LRRC18Q8N456 261 aa13.08□□□□□ -0.31
SPIDR-201ENST00000297423 TMEM156Q8N614 296 aa13.08□□□□□ -0.31
SPIDR-201ENST00000297423 CPNE4Q96A23 557 aaPredicted RBP13.08□□□□□ -0.31
SPIDR-201ENST00000297423 RPUSD4Q96CM3 377 aaKnown RBP13.08□□□□□ -0.31
SPIDR-201ENST00000297423 LRRC61Q9BV99 259 aa13.08□□□□□ -0.31
SPIDR-201ENST00000297423 KLF15Q9UIH9 416 aa13.08□□□□□ -0.31
SPIDR-201ENST00000297423 TMEM268Q5VZI3 342 aa13.08□□□□□ -0.32
SPIDR-201ENST00000297423 ZNF695Q8IW36 515 aa13.08□□□□□ -0.32
SPIDR-201ENST00000297423 LGI3Q8N145 548 aa13.08□□□□□ -0.32
SPIDR-201ENST00000297423 C11orf40Q8WZ69 217 aa13.08□□□□□ -0.32
SPIDR-201ENST00000297423 OR5B2Q96R09 309 aa13.08□□□□□ -0.32
SPIDR-201ENST00000297423 TUBA4BQ9H853 241 aa13.08□□□□□ -0.32
SPIDR-201ENST00000297423 SIRT7Q9NRC8 400 aa13.08□□□□□ -0.32
SPIDR-201ENST00000297423 ZNF141Q15928 474 aa13.08□□□□□ -0.32
SPIDR-201ENST00000297423 DEFB133Q30KQ1 61 aa13.08□□□□□ -0.32
SPIDR-201ENST00000297423 EMC4Q5J8M3 183 aa13.08□□□□□ -0.32
SPIDR-201ENST00000297423 PHF19Q5T6S3 580 aa13.08□□□□□ -0.32
SPIDR-201ENST00000297423 FAAP24Q9BTP7 215 aa13.08□□□□□ -0.32
SPIDR-201ENST00000297423 GPR87Q9BY21 358 aa13.08□□□□□ -0.32
SPIDR-201ENST00000297423 TXNIPQ9H3M7 391 aa13.08□□□□□ -0.32
SPIDR-201ENST00000297423 PLEKHA2Q9HB19 425 aa13.08□□□□□ -0.32
SPIDR-201ENST00000297423 ARHGAP21Q5T5U3 1957 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 FAM221BA6H8Z2 402 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 RER1O15258 196 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 PTBP3O95758 552 aaKnown RBP13.07□□□□□ -0.32
SPIDR-201ENST00000297423 THNSL2Q86YJ6 484 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 C19orf47Q8N9M1 422 aaKnown RBP13.07□□□□□ -0.32
SPIDR-201ENST00000297423 CADM4Q8NFZ8 388 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 OR52M1Q8NGK5 317 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 OR11L1Q8NGX0 322 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 NT5CQ8TCD5 201 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 OR5B12Q96R08 314 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 ZNF442Q9H7R0 627 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 WFDC1Q9HC57 220 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 MYOZ1Q9NP98 299 aaPredicted RBP13.07□□□□□ -0.32
SPIDR-201ENST00000297423 PRDM6Q9NQX0 595 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 POMT1Q9Y6A1 747 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 DOCK11Q5JSL3 2073 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 IGHV3-20A0A0C4DH32 117 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 XKRY2A2RUG3 117 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 PPIHO43447 177 aaKnown RBP13.07□□□□□ -0.32
SPIDR-201ENST00000297423 WISP1O95388 367 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 PGA3P0DJD8 388 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 ATP6V0CP27449 155 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 ELLP55199 621 aaPredicted RBP13.07□□□□□ -0.32
SPIDR-201ENST00000297423 NSDHLQ15738 373 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 UBALD2Q8IYN6 164 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 ZNF524Q96C55 264 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 PRDM13Q9H4Q3 707 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 PRR19A6NJB7 356 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 HPNP05981 417 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 FAHP16930 419 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 OR5C1Q8NGR4 320 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 HOXB13Q92826 284 aaPredicted RBP13.07□□□□□ -0.32
SPIDR-201ENST00000297423 GNRHR2Q96P88 292 aa13.07□□□□□ -0.32
SPIDR-201ENST00000297423 HLA-GP17693 338 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 SPINK2P20155 84 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 BMP5P22003 454 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 ZNF121P58317 390 aaPredicted RBP13.06□□□□□ -0.32
SPIDR-201ENST00000297423 IFITM10A6NMD0 228 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 TGFBR3LH3BV60 316 aa13.06□□□□□ -0.32
SPIDR-201ENST00000297423 DEDDO75618 318 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms