RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 MFSD2BA6NFX1 497 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 H3BQ15 152 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 LPAR6P43657 344 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 NSUN5P2Q63ZY6 315 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 KLF13Q9Y2Y9 288 aaPredicted RBP9.8□□□□□ -0.84
PBRM1-201ENST00000296302 COL16A1Q07092 1604 aaPredicted RBP9.8□□□□□ -0.84
PBRM1-201ENST00000296302 HYAL3O43820 417 aaPredicted RBP9.8□□□□□ -0.84
PBRM1-201ENST00000296302 TMEM11P17152 192 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 AMTP48728 403 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 DYNLT3P51808 116 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 LGALS4P56470 323 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 RHOBP62745 196 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 IFI44Q8TCB0 444 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 ALKBH3Q96Q83 286 aaPredicted RBP9.8□□□□□ -0.84
PBRM1-201ENST00000296302 SLC25A22Q9H936 323 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 FKBP11Q9NYL4 201 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 FLRT3Q9NZU0 649 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 ST6GALNAC2Q9UJ37 374 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 ICAM5Q9UMF0 924 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 SOX15O60248 233 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 OR10J1P30954 320 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 HES1Q14469 280 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 UBE2V2Q15819 145 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 ZNF718Q3SXZ3 478 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 CST9Q5W186 159 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 ANGPTL4Q9BY76 406 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 TWSG1Q9GZX9 223 aa9.8□□□□□ -0.84
PBRM1-201ENST00000296302 VDAC1P21796 283 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 SPCS3P61009 180 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 RPS16P62249 146 aaKnown RBP9.79□□□□□ -0.84
PBRM1-201ENST00000296302 TMEM196Q5HYL7 178 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 ETFRF1Q6IPR1 90 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 C6orf15Q6UXA7 325 aaPredicted RBP9.79□□□□□ -0.84
PBRM1-201ENST00000296302 ZNF547Q8IVP9 402 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 CPEB3Q8NE35 698 aaKnown RBP9.79□□□□□ -0.84
PBRM1-201ENST00000296302 HLA-CQ95604 372 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 MCHR2Q969V1 340 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 PTX4Q96A99 478 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 NINQ8N4C6 2090 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 OR5H15A6NDH6 313 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 OR5H1A6NKK0 313 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 FAM74A7A6NL05 159 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 ST8SIA5O15466 376 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 METAP1P53582 386 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 CEBPEQ15744 281 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 MESTQ5EB52 335 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 Q6ZN92 141 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 MRGPRX3Q96LB0 322 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 WDR61Q9GZS3 305 aaKnown RBP9.79□□□□□ -0.84
PBRM1-201ENST00000296302 SLC52A3Q9NQ40 469 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 TRAV34A0A0B4J273 112 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 SPTY2D1-AS1A0A0U1RR47 76 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 LINC01387J3KSC0 135 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 CDS2O95674 445 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 CD160O95971 181 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 TMEM215Q68D42 235 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 TAAR3PQ9P1P4 343 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 TRAV8-7A0A075B6U6 113 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 IGHV3-64DA0A0J9YX35 117 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 CRYM-AS1A6NIL9 109 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 RPLP1P05386 114 aaKnown RBP9.79□□□□□ -0.84
PBRM1-201ENST00000296302 FAM157BP0CG42 384 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 FGF8P55075 233 aaPredicted RBP9.79□□□□□ -0.84
PBRM1-201ENST00000296302 C10orf35Q96D05 121 aa9.79□□□□□ -0.84
PBRM1-201ENST00000296302 GYPAP02724 150 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 ZNF25P17030 456 aaPredicted RBP9.78□□□□□ -0.84
PBRM1-201ENST00000296302 CEACAM6P40199 344 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 AGFG1P52594 562 aaKnown RBP9.78□□□□□ -0.84
PBRM1-201ENST00000296302 STUMQ69YW2 141 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 ZNF660Q6AZW8 331 aaPredicted RBP9.78□□□□□ -0.84
PBRM1-201ENST00000296302 BTNL3Q6UXE8 466 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 MRGPRGQ86SM5 289 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 ATG4DQ86TL0 474 aaPredicted RBP9.78□□□□□ -0.84
PBRM1-201ENST00000296302 MEGF10Q96KG7 1140 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 GSX1Q9H4S2 264 aaPredicted RBP9.78□□□□□ -0.84
PBRM1-201ENST00000296302 TIMM9Q9Y5J7 89 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 SYNGR2O43760 224 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 HLA-DQB1P01920 261 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 COX14Q96I36 57 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 BARX1Q9HBU1 254 aaPredicted RBP9.78□□□□□ -0.84
PBRM1-201ENST00000296302 STARD10Q9Y365 291 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 NUP214P35658 2090 aaPredicted RBP9.78□□□□□ -0.84
PBRM1-201ENST00000296302 TTC3P53804 2025 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 SOCS1O15524 211 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 CT62P0C5K7 136 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 MICBQ29980 383 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 RGS7BPQ6MZT1 257 aaPredicted RBP9.78□□□□□ -0.84
PBRM1-201ENST00000296302 LINC00518Q8N0U6 118 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 PUSL1Q8N0Z8 303 aaKnown RBP9.78□□□□□ -0.84
PBRM1-201ENST00000296302 OR10G8Q8NGN5 311 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 POM121Q96HA1 1249 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 IP6K3Q96PC2 410 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 GPA33Q99795 319 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 MENTQ9BUN1 341 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 M0R1X1 148 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 NGFP01138 241 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 CRYAAP02489 173 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 EWSR1Q01844 656 aaKnown RBP eCLIP9.78□□□□□ -0.84
PBRM1-201ENST00000296302 PRDX4Q13162 271 aa9.78□□□□□ -0.84
PBRM1-201ENST00000296302 OR5I1Q13606 314 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms