RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 PCP4L1A6NKN8 68 aa13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 CYTIPO60759 359 aa13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 NPBWR2P48146 333 aa13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 PPIAP62937 165 aaKnown RBP13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 CYCSP99999 105 aaKnown RBP13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 PAN3Q58A45 887 aaKnown RBP13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 ATP1A1-AS1Q5TC04 95 aa13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 H3F3CQ6NXT2 135 aa13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 SLC22A25Q6T423 547 aa13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 MARS2Q96GW9 593 aaKnown RBP13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 hCG_38984A0A1B0GV85 526 aa13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 C3orf80F5H4A9 247 aa13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 IFNA2P01563 188 aa13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 RPS2P15880 293 aaKnown RBP13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 AIMP2Q13155 320 aaKnown RBP13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 IAH1Q2TAA2 248 aaPredicted RBP13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 C10orf35Q96D05 121 aa13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 PIK3IP1Q96FE7 263 aa13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 LRRC46Q96FV0 321 aa13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 ZNF442Q9H7R0 627 aa13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 PCDHB10Q9UN67 800 aa13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 DSPP15924 2871 aaKnown RBP13.69□□□□□ -0.22
NCKIPSD-201ENST00000294129 FAM74A7A6NL05 159 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 PCBD1P61457 104 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 FAM74A3Q4VXF1 159 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 TMEM164Q5U3C3 297 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 LHFPL2Q6ZUX7 228 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 OSR2Q8N2R0 312 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 ZNF703Q9H7S9 590 aaPredicted RBP13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 CRIM1Q9NZV1 1036 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 FCGR3AP08637 254 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 PIGPP57054 158 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 CLEC9AQ6UXN8 241 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 SGPP2Q8IWX5 399 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 ZNF611Q8N823 705 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 OR5T2Q8NGG2 359 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 OR56B2PQ8NGI1 322 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 FAM173AQ9BQD7 235 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 SMIM3Q9BZL3 60 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 LSM5Q9Y4Y9 91 aaKnown RBP13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 PRR14LQ5THK1 2151 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 A0A1B0GW55 424 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 DUX4L2P0CJ85 424 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 DUX4L3P0CJ86 424 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 DUX4L4P0CJ87 422 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 DUX4L5P0CJ88 424 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 DUX4L6P0CJ89 424 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 DUX4L7P0CJ90 424 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 PRKACAP17612 351 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 PDZK1IP1Q13113 114 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 PDSS1Q5T2R2 415 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 MARC2Q969Z3 335 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 C2orf50Q96LR7 162 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 C12orf49Q9H741 205 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 DUX4Q9UBX2 424 aa13.68□□□□□ -0.22
NCKIPSD-201ENST00000294129 ZNF503-AS2A6NEH8 195 aa13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 CEACAM18A8MTB9 384 aa13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 DUSP1P28562 367 aa13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 ABCA11PQ4W5N1 156 aa13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 DCAF10Q5QP82 559 aa13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 EIF4E3Q8N5X7 224 aaKnown RBP13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 BPIFCQ8NFQ6 507 aa13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 OR5L1Q8NGL2 311 aa13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 TTTY12Q9BZ98 90 aa13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 B4GALT7Q9UBV7 327 aa13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 DNASE2O00115 360 aaPredicted RBP13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 MMP7P09237 267 aaPredicted RBP13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 SP9P0CG40 484 aa13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 TPT1P13693 172 aaKnown RBP13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 CHATP28329 748 aa13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 FCGR2CP31995 323 aa13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 LHX2P50458 406 aa13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 RBM39Q14498 530 aaKnown RBP13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 ARL6IP1Q15041 203 aa13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 RIPPLY2Q5TAB7 128 aa13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 MRPL24Q96A35 216 aaKnown RBP13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 BARX1Q9HBU1 254 aaPredicted RBP13.67□□□□□ -0.22
NCKIPSD-201ENST00000294129 ZNF816-ZNF321PA0A0X1KG74 233 aa13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 SYNGR4O95473 234 aa13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 WNT2BQ93097 391 aa13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 SLAMF9Q96A28 289 aa13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 CPNE2Q96FN4 548 aaPredicted RBP13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 PARPBPQ9NWS1 579 aa13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 BOD1L1Q8NFC6 3051 aa13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 NOVA1P51513 510 aaKnown RBP13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 GPM6AP51674 278 aa13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 IGFBP7Q16270 282 aa13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 PRSS54Q6PEW0 395 aa13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 BAP18Q8IXM2 172 aa13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 TMEM251Q8N6I4 163 aa13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 IL22RA1Q8N6P7 574 aa13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 OR11L1Q8NGX0 322 aa13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 ZPBPQ9BS86 351 aa13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 TMEM231Q9H6L2 316 aa13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 PCDHB16Q9NRJ7 776 aa13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 NECAP2Q9NVZ3 263 aa13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 C1orf123Q9NWV4 160 aa13.66□□□□□ -0.22
NCKIPSD-201ENST00000294129 ZNF728P0DKX0 622 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 RCC1P18754 421 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms