RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 EML2O95834 649 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 KLF3P57682 345 aaPredicted RBP11.32□□□□□ -0.6
PTCD1-201ENST00000292478 SLC38A11Q08AI6 406 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 C16orf47Q6ZP98 133 aaPredicted RBP11.32□□□□□ -0.6
PTCD1-201ENST00000292478 MIXL1Q9H2W2 232 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 ZNF586Q9NXT0 402 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 OR6C3Q9NZP0 311 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 KRASP01116 189 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 SPEM2Q0P670 501 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 MIDNQ504T8 468 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 STARD10Q9Y365 291 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 KIAA0100Q14667 2235 aaKnown RBP11.31□□□□□ -0.6
PTCD1-201ENST00000292478 MCM3APO60318 1980 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 hADV38S2A0JD32 116 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 FOXS1O43638 330 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 PMP22Q01453 160 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 ZNF429Q86V71 674 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 C10orf111Q8N326 155 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 OR2C3Q8N628 320 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 OR2M3Q8NG83 312 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 SLC52A3Q9NQ40 469 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 CA10Q9NS85 328 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 ANXA10Q9UJ72 324 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 IGHV5-10-1A0A0J9YXX1 117 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 SOX15O60248 233 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 MMP16P51512 607 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 ZNF83P51522 516 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 IL24Q13007 206 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 ETFDHQ16134 617 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 DMRTC1Q5HYR2 192 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 LINC00596Q86U02 117 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 GPR137Q96N19 417 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 HES4Q9HCC6 221 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 TRDCB7Z8K6 153 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 GNB2P62879 340 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 HES3Q5TGS1 186 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.31□□□□□ -0.6
PTCD1-201ENST00000292478 ZNF721Q8TF20 911 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 SAT2Q96F10 170 aaPredicted RBP11.31□□□□□ -0.6
PTCD1-201ENST00000292478 RAB33BQ9H082 229 aa11.31□□□□□ -0.6
PTCD1-201ENST00000292478 F2RP25116 425 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 P2RY1P47900 373 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 SIGLECL1Q8N7X8 197 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 LRRC29Q8WV35 223 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 FBXO17Q96EF6 278 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 SLC26A1Q9H2B4 701 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 ATAD5Q96QE3 1844 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 MBPP02686 304 aaPredicted RBP11.3□□□□□ -0.6
PTCD1-201ENST00000292478 ACAA2P42765 397 aaKnown RBP11.3□□□□□ -0.6
PTCD1-201ENST00000292478 C2CD4CQ8TF44 421 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 AKR1E2Q96JD6 320 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 ESRP2Q9H6T0 727 aaKnown RBP11.3□□□□□ -0.6
PTCD1-201ENST00000292478 FAM96BQ9Y3D0 163 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 H3BMH7 237 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 H3BP45 60 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 IL9P15248 144 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 GAB4Q2WGN9 574 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 CTDSP1Q9GZU7 261 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 PNPP00491 289 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 IGHV4-34P06331 123 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 OR5AC1P0C628 307 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 TMIGD3P0DMS9 266 aaPredicted RBP11.3□□□□□ -0.6
PTCD1-201ENST00000292478 SIGLEC14Q08ET2 396 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 MPV17LQ2QL34 196 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 ALKBH6Q3KRA9 238 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.3□□□□□ -0.6
PTCD1-201ENST00000292478 C1QL3Q5VWW1 255 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 ZAR1Q86SH2 424 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 NECAP1Q8NC96 275 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 DEFB124Q8NES8 71 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 ST6GAL2Q96JF0 529 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 SLC45A2Q9UMX9 530 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 AMMECR1Q9Y4X0 333 aaPredicted RBP11.3□□□□□ -0.6
PTCD1-201ENST00000292478 TO15178 435 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 ONECUT2O95948 504 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 TNFAIP6P98066 277 aaPredicted RBP11.3□□□□□ -0.6
PTCD1-201ENST00000292478 FOXO1Q12778 655 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 B3GNTL1Q67FW5 361 aaPredicted RBP11.3□□□□□ -0.6
PTCD1-201ENST00000292478 STUMQ69YW2 141 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 MOB3BQ86TA1 216 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 SLC25A42Q86VD7 318 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 C9orf40Q8IXQ3 194 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 NRTNQ99748 197 aa11.3□□□□□ -0.6
PTCD1-201ENST00000292478 NXF2Q9GZY0 626 aaKnown RBP11.3□□□□□ -0.6
PTCD1-201ENST00000292478 CA11O75493 328 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 HSD17B13Q7Z5P4 300 aaPredicted RBP11.29□□□□□ -0.6
PTCD1-201ENST00000292478 OR5C1Q8NGR4 320 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 ASB5Q8WWX0 329 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 GREM1O60565 184 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 FOXC1Q12948 553 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 FFAR4Q5NUL3 377 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 LRRTM1Q86UE6 522 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 UBAC2Q8NBM4 344 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 TMEM104Q8NE00 496 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 PSG11Q9UQ72 335 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 ZNF835Q9Y2P0 537 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 ZNF320A2RRD8 509 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 FCGR3BO75015 233 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 LIFP15018 202 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 FABP9Q0Z7S8 132 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms