RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 RCL1Q9Y2P8 373 aaKnown RBP13.89□□□□□ -0.19
SMAD6-201ENST00000288840 A0A0G2JMM0 328 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 A0A1W2PPB8 328 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 A0A1W2PRS3 328 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 SHISA7A6NL88 538 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 KIR3DP1A8MWS1 328 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 ACTL6AO96019 429 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 LIFP15018 202 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 RPS16P62249 146 aaKnown RBP13.89□□□□□ -0.19
SMAD6-201ENST00000288840 RAC1P63000 192 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 PJVKQ0ZLH3 352 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 ACER2Q5QJU3 275 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 CMTM1Q8IZ96 169 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 GLYATL2Q8WU03 294 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 MRPL13Q9BYD1 178 aaKnown RBP13.89□□□□□ -0.19
SMAD6-201ENST00000288840 SRXN1Q9BYN0 137 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 REG4Q9BYZ8 158 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 UQCC1Q9NVA1 299 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 CADP27708 2225 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 CELSR3Q9NYQ7 3312 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 FAM24AA6NFZ4 105 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 RFPL3SP0C7P2 107 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 TUBG1P23258 451 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 NPBWR1P48145 328 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 PCBD1P61457 104 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 ARF1P84077 181 aaKnown RBP13.89□□□□□ -0.19
SMAD6-201ENST00000288840 PLPPR2Q96GM1 343 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 ACKR3P25106 362 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 PTGER4P35408 488 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 OVCH2Q7RTZ1 564 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 SHARPINQ9H0F6 387 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 FN3KRPQ9HA64 309 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 ZNF175Q9Y473 711 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 A8MXK9 166 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 SLC34A2O95436 690 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 RD3LP0DJH9 198 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 AKR1C8PQ5T2L2 129 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 OR2G3Q8NGZ4 309 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 SFT2D1Q8WV19 159 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 ZNF488Q96MN9 340 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 GPR37O15354 613 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 EIF3GO75821 320 aaKnown RBP eCLIP13.88□□□□□ -0.19
SMAD6-201ENST00000288840 NKX2-1P43699 371 aaPredicted RBP13.88□□□□□ -0.19
SMAD6-201ENST00000288840 POLR2GP62487 172 aaKnown RBP eCLIP13.88□□□□□ -0.19
SMAD6-201ENST00000288840 NHLH2Q02577 135 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 ZNF92Q03936 586 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 CNEP1R1Q8N9A8 125 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 PTX4Q96A99 478 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 CHST5Q9GZS9 411 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 FAM86C1Q9NVL1 165 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 LOXL2Q9Y4K0 774 aa13.88□□□□□ -0.19
SMAD6-201ENST00000288840 CHCHD2Q9Y6H1 151 aaPredicted RBP13.88□□□□□ -0.19
SMAD6-201ENST00000288840 FREM1Q5H8C1 2179 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 ZNF732B4DXR9 585 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 JTBO76095 146 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 GRPP07492 148 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 SLC25A4P12235 298 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 RPS10P46783 165 aaKnown RBP13.87□□□□□ -0.19
SMAD6-201ENST00000288840 TSC22D1Q15714 1073 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 ETV3LQ6ZN32 361 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 OR2V1Q8NHB1 315 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 DNASE2BQ8WZ79 361 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 BOKQ9UMX3 212 aaPredicted RBP13.87□□□□□ -0.19
SMAD6-201ENST00000288840 CDRT15L2A8MXV6 281 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 WDR1O75083 606 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 IGHMP01871 453 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 MUC1P15941 1255 aaPredicted RBP13.87□□□□□ -0.19
SMAD6-201ENST00000288840 TGIF1Q15583 401 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 AVPI1Q5T686 147 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 EXTL1Q92935 676 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 UTP23Q9BRU9 249 aaKnown RBP13.87□□□□□ -0.19
SMAD6-201ENST00000288840 HES7Q9BYE0 225 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 PRR14LQ5THK1 2151 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 WIPF3A6NGB9 483 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 ANKRD30BLA7E2S9 258 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 CER1O95813 267 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 ARG1P05089 322 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 APLNRP35414 380 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 RAB2AP61019 212 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 CARFQ8N187 725 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 SUMF2Q8NBJ7 301 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 OR2Y1Q8NGV0 311 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 TGIF2Q9GZN2 237 aa13.87□□□□□ -0.19
SMAD6-201ENST00000288840 KCNJ3P48549 501 aa13.86□□□□□ -0.19
SMAD6-201ENST00000288840 LSM6P62312 80 aaKnown RBP13.86□□□□□ -0.19
SMAD6-201ENST00000288840 C17orf82Q86X59 251 aaPredicted RBP13.86□□□□□ -0.19
SMAD6-201ENST00000288840 SCGB1C1Q8TD33 95 aa13.86□□□□□ -0.19
SMAD6-201ENST00000288840 SAP25Q8TEE9 199 aa13.86□□□□□ -0.19
SMAD6-201ENST00000288840 NMES1Q9C002 83 aa13.86□□□□□ -0.19
SMAD6-201ENST00000288840 PCED1AQ9H1Q7 454 aa13.86□□□□□ -0.19
SMAD6-201ENST00000288840 SLC26A1Q9H2B4 701 aa13.86□□□□□ -0.19
SMAD6-201ENST00000288840 PPP1R3CQ9UQK1 317 aa13.86□□□□□ -0.19
SMAD6-201ENST00000288840 ZNF587BE7ETH6 402 aa13.86□□□□□ -0.19
SMAD6-201ENST00000288840 MFNGO00587 321 aa13.86□□□□□ -0.19
SMAD6-201ENST00000288840 CD8AP01732 235 aa13.86□□□□□ -0.19
SMAD6-201ENST00000288840 GSK3AP49840 483 aa13.86□□□□□ -0.19
SMAD6-201ENST00000288840 PCOLCEQ15113 449 aa13.86□□□□□ -0.19
SMAD6-201ENST00000288840 AADACL3Q5VUY0 350 aa13.86□□□□□ -0.19
SMAD6-201ENST00000288840 SHEQ5VZ18 495 aa13.86□□□□□ -0.19
SMAD6-201ENST00000288840 STX12Q86Y82 276 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms