RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 DBX1A6NMT0 343 aa16.6■□□□□ 0.25
BRAF-201ENST00000288602 CEACAM18A8MTB9 384 aa16.6■□□□□ 0.25
BRAF-201ENST00000288602 SPDEFO95238 335 aa16.6■□□□□ 0.25
BRAF-201ENST00000288602 PGAM2P15259 253 aa16.6■□□□□ 0.25
BRAF-201ENST00000288602 RPA2P15927 270 aa16.6■□□□□ 0.25
BRAF-201ENST00000288602 DAZAP2Q15038 168 aaPredicted RBP16.6■□□□□ 0.25
BRAF-201ENST00000288602 DEFB109BQ30KR1 87 aa16.6■□□□□ 0.25
BRAF-201ENST00000288602 ANKRD55Q3KP44 614 aa16.6■□□□□ 0.25
BRAF-201ENST00000288602 C11orf87Q6NUJ2 197 aa16.6■□□□□ 0.25
BRAF-201ENST00000288602 GSG1LQ6UXU4 331 aa16.6■□□□□ 0.25
BRAF-201ENST00000288602 P4HA3Q7Z4N8 544 aa16.6■□□□□ 0.25
BRAF-201ENST00000288602 MDP1Q86V88 176 aa16.6■□□□□ 0.25
BRAF-201ENST00000288602 SVILO95425 2214 aa16.6■□□□□ 0.25
BRAF-201ENST00000288602 OR7C1O76099 320 aaPredicted RBP16.59■□□□□ 0.25
BRAF-201ENST00000288602 FCGR3AP08637 254 aa16.59■□□□□ 0.25
BRAF-201ENST00000288602 BCL3P20749 454 aa16.59■□□□□ 0.25
BRAF-201ENST00000288602 MPGP29372 298 aa16.59■□□□□ 0.25
BRAF-201ENST00000288602 STK11Q15831 433 aa16.59■□□□□ 0.25
BRAF-201ENST00000288602 NHLRC3Q5JS37 347 aa16.59■□□□□ 0.25
BRAF-201ENST00000288602 CLLU1Q5K131 121 aa16.59■□□□□ 0.25
BRAF-201ENST00000288602 MYPOPQ86VE0 399 aaPredicted RBP16.59■□□□□ 0.25
BRAF-201ENST00000288602 OR5M9Q8NGP3 310 aa16.59■□□□□ 0.25
BRAF-201ENST00000288602 MARS2Q96GW9 593 aaKnown RBP16.59■□□□□ 0.25
BRAF-201ENST00000288602 GSX2Q9BZM3 304 aa16.59■□□□□ 0.25
BRAF-201ENST00000288602 IL36RNQ9UBH0 155 aa16.59■□□□□ 0.25
BRAF-201ENST00000288602 HSF4Q9ULV5 492 aa16.59■□□□□ 0.25
BRAF-201ENST00000288602 LINC00862A6NCI5 91 aa16.59■□□□□ 0.25
BRAF-201ENST00000288602 SFT2D2O95562 160 aa16.59■□□□□ 0.25
BRAF-201ENST00000288602 COX5BP10606 129 aa16.59■□□□□ 0.25
BRAF-201ENST00000288602 HLA-GP17693 338 aa16.59■□□□□ 0.25
BRAF-201ENST00000288602 IL32P24001 234 aa16.59■□□□□ 0.25
BRAF-201ENST00000288602 SRSF4Q08170 494 aaKnown RBP16.59■□□□□ 0.25
BRAF-201ENST00000288602 ESCO2Q56NI9 601 aa16.59■□□□□ 0.25
BRAF-201ENST00000288602 COQ8AQ8NI60 647 aa16.59■□□□□ 0.25
BRAF-201ENST00000288602 ASB13Q8WXK3 278 aa16.59■□□□□ 0.25
BRAF-201ENST00000288602 TRIB1Q96RU8 372 aa16.59■□□□□ 0.25
BRAF-201ENST00000288602 PQLC2LA1A4F0 135 aa16.58■□□□□ 0.25
BRAF-201ENST00000288602 CA11O75493 328 aa16.58■□□□□ 0.25
BRAF-201ENST00000288602 CELA3BP08861 270 aa16.58■□□□□ 0.25
BRAF-201ENST00000288602 APLNRP35414 380 aa16.58■□□□□ 0.25
BRAF-201ENST00000288602 RBM11P57052 281 aaKnown RBP16.58■□□□□ 0.25
BRAF-201ENST00000288602 RAB14P61106 215 aa16.58■□□□□ 0.25
BRAF-201ENST00000288602 RTL6Q6ICC9 239 aa16.58■□□□□ 0.25
BRAF-201ENST00000288602 Q6ZPA2 131 aa16.58■□□□□ 0.25
BRAF-201ENST00000288602 BCL2L2Q92843 193 aaPredicted RBP16.58■□□□□ 0.25
BRAF-201ENST00000288602 ZNF732B4DXR9 585 aa16.58■□□□□ 0.24
BRAF-201ENST00000288602 FGL1Q08830 312 aa16.58■□□□□ 0.24
BRAF-201ENST00000288602 PPA1Q15181 289 aa16.58■□□□□ 0.24
BRAF-201ENST00000288602 TSC22D1Q15714 1073 aa16.58■□□□□ 0.24
BRAF-201ENST00000288602 C5orf24Q7Z6I8 188 aa16.58■□□□□ 0.24
BRAF-201ENST00000288602 ZDHHC23Q8IYP9 409 aa16.58■□□□□ 0.24
BRAF-201ENST00000288602 OR5H8P0DN80 308 aa16.57■□□□□ 0.24
BRAF-201ENST00000288602 COMMD7Q86VX2 200 aa16.57■□□□□ 0.24
BRAF-201ENST00000288602 TECTBQ96PL2 329 aa16.57■□□□□ 0.24
BRAF-201ENST00000288602 WDR13Q9H1Z4 485 aa16.57■□□□□ 0.24
BRAF-201ENST00000288602 NARFLQ9H6Q4 476 aa16.57■□□□□ 0.24
BRAF-201ENST00000288602 ZNF442Q9H7R0 627 aa16.57■□□□□ 0.24
BRAF-201ENST00000288602 IL36GQ9NZH8 169 aa16.57■□□□□ 0.24
BRAF-201ENST00000288602 SPEF1Q9Y4P9 236 aa16.57■□□□□ 0.24
BRAF-201ENST00000288602 HSPB6O14558 160 aa16.57■□□□□ 0.24
BRAF-201ENST00000288602 SS18L1O75177 396 aaPredicted RBP16.57■□□□□ 0.24
BRAF-201ENST00000288602 LYZL6O75951 148 aa16.57■□□□□ 0.24
BRAF-201ENST00000288602 RPS2P15880 293 aaKnown RBP16.57■□□□□ 0.24
BRAF-201ENST00000288602 DUSP1P28562 367 aa16.57■□□□□ 0.24
BRAF-201ENST00000288602 ESPL1Q14674 2120 aa16.57■□□□□ 0.24
BRAF-201ENST00000288602 CEACAM21Q3KPI0 293 aa16.57■□□□□ 0.24
BRAF-201ENST00000288602 SLC22A25Q6T423 547 aa16.57■□□□□ 0.24
BRAF-201ENST00000288602 SPERTQ8NA61 448 aa16.57■□□□□ 0.24
BRAF-201ENST00000288602 TOMM40LQ969M1 308 aa16.57■□□□□ 0.24
BRAF-201ENST00000288602 SCGB3A2Q96PL1 93 aa16.57■□□□□ 0.24
BRAF-201ENST00000288602 TNFSF18Q9UNG2 199 aa16.57■□□□□ 0.24
BRAF-201ENST00000288602 CD300LBA8K4G0 201 aa16.56■□□□□ 0.24
BRAF-201ENST00000288602 TOR2AQ5JU69 321 aa16.56■□□□□ 0.24
BRAF-201ENST00000288602 SLC30A7Q8NEW0 376 aa16.56■□□□□ 0.24
BRAF-201ENST00000288602 CCDC120Q96HB5 630 aa16.56■□□□□ 0.24
BRAF-201ENST00000288602 VRK1Q99986 396 aaPredicted RBP16.56■□□□□ 0.24
BRAF-201ENST00000288602 MBD2Q9UBB5 411 aa16.56■□□□□ 0.24
BRAF-201ENST00000288602 PRR14LQ5THK1 2151 aa16.56■□□□□ 0.24
BRAF-201ENST00000288602 SHANK1Q9Y566 2161 aa16.56■□□□□ 0.24
BRAF-201ENST00000288602 TEX46H3BTG2 121 aa16.56■□□□□ 0.24
BRAF-201ENST00000288602 PDCD6O75340 191 aa16.56■□□□□ 0.24
BRAF-201ENST00000288602 PTGER4P35408 488 aa16.56■□□□□ 0.24
BRAF-201ENST00000288602 ZNF660Q6AZW8 331 aaPredicted RBP16.56■□□□□ 0.24
BRAF-201ENST00000288602 OR2T2Q6IF00 324 aa16.56■□□□□ 0.24
BRAF-201ENST00000288602 MRPS24Q96EL2 167 aaKnown RBP16.56■□□□□ 0.24
BRAF-201ENST00000288602 ZNF488Q96MN9 340 aa16.56■□□□□ 0.24
BRAF-201ENST00000288602 MTCH1Q9NZJ7 389 aa16.56■□□□□ 0.24
BRAF-201ENST00000288602 RNF222A6NCQ9 220 aa16.55■□□□□ 0.24
BRAF-201ENST00000288602 SYNGR1O43759 233 aa16.55■□□□□ 0.24
BRAF-201ENST00000288602 RLN2P04090 185 aa16.55■□□□□ 0.24
BRAF-201ENST00000288602 HOXB5P09067 269 aa16.55■□□□□ 0.24
BRAF-201ENST00000288602 FXYD4P59646 89 aa16.55■□□□□ 0.24
BRAF-201ENST00000288602 PRSS33Q8NF86 280 aa16.55■□□□□ 0.24
BRAF-201ENST00000288602 GMPPAQ96IJ6 420 aaPredicted RBP16.55■□□□□ 0.24
BRAF-201ENST00000288602 OR10C1Q96KK4 312 aa16.55■□□□□ 0.24
BRAF-201ENST00000288602 DMRTA2Q96SC8 542 aa16.55■□□□□ 0.24
BRAF-201ENST00000288602 C1QTNF6Q9BXI9 259 aa16.55■□□□□ 0.24
BRAF-201ENST00000288602 C14orf166Q9Y224 244 aaKnown RBP16.55■□□□□ 0.24
BRAF-201ENST00000288602 SHOXO15266 292 aa16.55■□□□□ 0.24
BRAF-201ENST00000288602 IGHV1-2P23083 117 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms