RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 MT-ND2P03891 347 aa20.76■□□□□ 0.91
PDF-201ENST00000288022 CD2P06729 351 aa20.76■□□□□ 0.91
PDF-201ENST00000288022 GPR157Q5UAW9 335 aa20.76■□□□□ 0.91
PDF-201ENST00000288022 Q8IYB0 196 aa20.76■□□□□ 0.91
PDF-201ENST00000288022 LY6G5BQ8NDX9 201 aa20.76■□□□□ 0.91
PDF-201ENST00000288022 EMG1Q92979 244 aaKnown RBP20.76■□□□□ 0.91
PDF-201ENST00000288022 FKBP14Q9NWM8 211 aa20.76■□□□□ 0.91
PDF-201ENST00000288022 ZNF281Q9Y2X9 895 aa20.76■□□□□ 0.91
PDF-201ENST00000288022 A0A1W2PQ09 198 aa20.75■□□□□ 0.91
PDF-201ENST00000288022 VENTXO95231 258 aa20.75■□□□□ 0.91
PDF-201ENST00000288022 HSPA13P48723 471 aa20.75■□□□□ 0.91
PDF-201ENST00000288022 KRTAP24-1Q3LI83 254 aa20.75■□□□□ 0.91
PDF-201ENST00000288022 RBMS3Q6XE24 437 aaKnown RBP20.75■□□□□ 0.91
PDF-201ENST00000288022 CMTM4Q8IZR5 234 aa20.75■□□□□ 0.91
PDF-201ENST00000288022 BCL6BQ8N143 479 aaPredicted RBP20.75■□□□□ 0.91
PDF-201ENST00000288022 OR5D18Q8NGL1 313 aa20.75■□□□□ 0.91
PDF-201ENST00000288022 TBX15Q96SF7 602 aa20.75■□□□□ 0.91
PDF-201ENST00000288022 SIRPDQ9H106 197 aa20.75■□□□□ 0.91
PDF-201ENST00000288022 ERGIC3Q9Y282 383 aa20.75■□□□□ 0.91
PDF-201ENST00000288022 PNMA8CA0A1B0GUJ8 204 aa20.74■□□□□ 0.91
PDF-201ENST00000288022 MMP9P14780 707 aa20.74■□□□□ 0.91
PDF-201ENST00000288022 RAB3AP20336 220 aa20.74■□□□□ 0.91
PDF-201ENST00000288022 BCL3P20749 454 aa20.74■□□□□ 0.91
PDF-201ENST00000288022 MYF6P23409 242 aa20.74■□□□□ 0.91
PDF-201ENST00000288022 WNT4P56705 351 aa20.74■□□□□ 0.91
PDF-201ENST00000288022 TAS2R43P59537 309 aa20.74■□□□□ 0.91
PDF-201ENST00000288022 PDZK1IP1Q13113 114 aa20.74■□□□□ 0.91
PDF-201ENST00000288022 RIPK1Q13546 671 aa20.74■□□□□ 0.91
PDF-201ENST00000288022 DMKNQ6E0U4 476 aaPredicted RBP20.74■□□□□ 0.91
PDF-201ENST00000288022 FIP1L1Q6UN15 594 aaKnown RBP20.74■□□□□ 0.91
PDF-201ENST00000288022 USP43Q70EL4 1123 aa20.74■□□□□ 0.91
PDF-201ENST00000288022 ZNF485Q8NCK3 441 aa20.74■□□□□ 0.91
PDF-201ENST00000288022 C8orf46Q8TAG6 207 aa20.74■□□□□ 0.91
PDF-201ENST00000288022 GHSRQ92847 366 aa20.74■□□□□ 0.91
PDF-201ENST00000288022 MYDGFQ969H8 173 aa20.74■□□□□ 0.91
PDF-201ENST00000288022 JMJD8Q96S16 334 aa20.74■□□□□ 0.91
PDF-201ENST00000288022 ANKRD60Q9BZ19 345 aa20.74■□□□□ 0.91
PDF-201ENST00000288022 RBFOX1Q9NWB1 397 aaKnown RBP20.74■□□□□ 0.91
PDF-201ENST00000288022 KPTNQ9Y664 436 aa20.74■□□□□ 0.91
PDF-201ENST00000288022 MAGEB3O15480 346 aa20.73■□□□□ 0.91
PDF-201ENST00000288022 ANGPTL7O43827 346 aa20.73■□□□□ 0.91
PDF-201ENST00000288022 CDK1P06493 297 aa20.73■□□□□ 0.91
PDF-201ENST00000288022 NPBWR2P48146 333 aa20.73■□□□□ 0.91
PDF-201ENST00000288022 HILS1P60008 231 aa20.73■□□□□ 0.91
PDF-201ENST00000288022 PDCD1Q15116 288 aa20.73■□□□□ 0.91
PDF-201ENST00000288022 BRD3OSQ6XYD6 125 aa20.73■□□□□ 0.91
PDF-201ENST00000288022 RNF144BQ7Z419 303 aa20.73■□□□□ 0.91
PDF-201ENST00000288022 FAM185AQ8N0U4 392 aa20.73■□□□□ 0.91
PDF-201ENST00000288022 SIGLECL1Q8N7X8 197 aa20.73■□□□□ 0.91
PDF-201ENST00000288022 ASCC1Q8N9N2 400 aaKnown RBP20.73■□□□□ 0.91
PDF-201ENST00000288022 OR13C5Q8NGS8 318 aa20.73■□□□□ 0.91
PDF-201ENST00000288022 TMEM106AQ96A25 262 aa20.73■□□□□ 0.91
PDF-201ENST00000288022 TAS2R4Q9NYW5 299 aa20.73■□□□□ 0.91
PDF-201ENST00000288022 ALX3O95076 343 aa20.72■□□□□ 0.91
PDF-201ENST00000288022 CALCBP10092 127 aa20.72■□□□□ 0.91
PDF-201ENST00000288022 SNU13P55769 128 aaKnown RBP20.72■□□□□ 0.91
PDF-201ENST00000288022 COL10A1Q03692 680 aa20.72■□□□□ 0.91
PDF-201ENST00000288022 VMO1Q7Z5L0 202 aa20.72■□□□□ 0.91
PDF-201ENST00000288022 FAM58AQ8N1B3 248 aa20.72■□□□□ 0.91
PDF-201ENST00000288022 KIR3DL3Q8N743 410 aa20.72■□□□□ 0.91
PDF-201ENST00000288022 NANOGP1Q8N7R0 232 aa20.72■□□□□ 0.91
PDF-201ENST00000288022 LHX4Q969G2 390 aa20.72■□□□□ 0.91
PDF-201ENST00000288022 DMRTB1Q96MA1 342 aa20.72■□□□□ 0.91
PDF-201ENST00000288022 TPRKBQ9Y3C4 175 aa20.72■□□□□ 0.91
PDF-201ENST00000288022 TRBV23-1A0A0A0MS06 115 aa20.71■□□□□ 0.91
PDF-201ENST00000288022 CHRM2P08172 466 aa20.71■□□□□ 0.91
PDF-201ENST00000288022 TMEM225BP0DP42 221 aa20.71■□□□□ 0.91
PDF-201ENST00000288022 PRKACAP17612 351 aa20.71■□□□□ 0.91
PDF-201ENST00000288022 KISS1Q15726 138 aa20.71■□□□□ 0.91
PDF-201ENST00000288022 SATL1Q86VE3 508 aa20.71■□□□□ 0.91
PDF-201ENST00000288022 PHC2Q8IXK0 858 aa20.71■□□□□ 0.91
PDF-201ENST00000288022 CPNE2Q96FN4 548 aaPredicted RBP20.71■□□□□ 0.91
PDF-201ENST00000288022 GPER1Q99527 375 aa20.71■□□□□ 0.91
PDF-201ENST00000288022 C19orf24Q9BVV8 132 aa20.71■□□□□ 0.91
PDF-201ENST00000288022 IL36RNQ9UBH0 155 aa20.71■□□□□ 0.91
PDF-201ENST00000288022 FBN1P35555 2871 aaKnown RBP20.7■□□□□ 0.9
PDF-201ENST00000288022 TK1P04183 234 aa20.7■□□□□ 0.9
PDF-201ENST00000288022 PPP3R1P63098 170 aa20.7■□□□□ 0.9
PDF-201ENST00000288022 YIF1BQ5BJH7 314 aa20.7■□□□□ 0.9
PDF-201ENST00000288022 RUSC1-AS1Q66K80 236 aa20.7■□□□□ 0.9
PDF-201ENST00000288022 PDZD9Q8IXQ8 264 aa20.7■□□□□ 0.9
PDF-201ENST00000288022 OR51A2Q8NGJ7 313 aa20.7■□□□□ 0.9
PDF-201ENST00000288022 CNBD2Q96M20 576 aa20.7■□□□□ 0.9
PDF-201ENST00000288022 MND1Q9BWT6 205 aa20.7■□□□□ 0.9
PDF-201ENST00000288022 FAM234AQ9H0X4 552 aa20.7■□□□□ 0.9
PDF-201ENST00000288022 SOX21Q9Y651 276 aaPredicted RBP20.7■□□□□ 0.9
PDF-201ENST00000288022 ATRQ13535 2644 aa20.7■□□□□ 0.9
PDF-201ENST00000288022 IGKV1-12A0A0C4DH73 117 aa20.69■□□□□ 0.9
PDF-201ENST00000288022 CENPVL3A0A0U1RRI6 287 aa20.69■□□□□ 0.9
PDF-201ENST00000288022 HAND1O96004 215 aa20.69■□□□□ 0.9
PDF-201ENST00000288022 IGKV1D-12P01611 117 aa20.69■□□□□ 0.9
PDF-201ENST00000288022 CELP19835 753 aa20.69■□□□□ 0.9
PDF-201ENST00000288022 DUSP1P28562 367 aa20.69■□□□□ 0.9
PDF-201ENST00000288022 BLMHQ13867 455 aa20.69■□□□□ 0.9
PDF-201ENST00000288022 C9orf139Q6ZV77 190 aa20.69■□□□□ 0.9
PDF-201ENST00000288022 SAXO1Q8IYX7 474 aa20.69■□□□□ 0.9
PDF-201ENST00000288022 OR4M1Q8NGD0 313 aa20.69■□□□□ 0.9
PDF-201ENST00000288022 SGCDQ92629 289 aa20.69■□□□□ 0.9
PDF-201ENST00000288022 PGLYRP3Q96LB9 341 aa20.69■□□□□ 0.9
PDF-201ENST00000288022 SIRT7Q9NRC8 400 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms