RNA–Protein interactions for RNA: ENST00000287263.8

RAB11FIP1-201, Transcript of RAB11 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11FIP1, Length 6,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-201ENST00000287263 MAP1LC3CQ9BXW4 147 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 SEC11CQ9BY50 192 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 OR51M1Q9H341 326 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 KCNE3Q9Y6H6 103 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 PHIPQ8WWQ0 1821 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 FZD6O60353 706 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 NDUFB6O95139 128 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 NMUP48645 174 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 UBE2V2Q15819 145 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 SSX8Q7RTT4 187 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 OR2M3Q8NG83 312 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 OXGR1Q96P68 337 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 LPAR2Q9HBW0 351 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 DUS4LO95620 317 aaKnown RBP12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 CA2P00918 260 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 HTN1P15515 57 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 SLC6A1P30531 599 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 LHFPL2Q6ZUX7 228 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 MORN4Q8NDC4 146 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 NRTNQ99748 197 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 DDA1Q9BW61 102 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 SLCO1C1Q9NYB5 712 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 NAGKQ9UJ70 344 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 HSPB8Q9UJY1 196 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 COL16A1Q07092 1604 aaPredicted RBP12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 J3KRW8 73 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 MASP2O00187 686 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 MPC2O95563 127 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 DHRS2Q13268 280 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 S1PR3Q99500 378 aa12.91□□□□□ -0.34
RAB11FIP1-201ENST00000287263 DUXBA0A1W2PPF3 345 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 MMP9P14780 707 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 PET117Q6UWS5 81 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 OR1L3Q8NH93 324 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 MISP3Q96FF7 219 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 LINC00862A6NCI5 91 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 CD40P25942 277 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 PPP1CAP62136 330 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 SRSF9Q13242 221 aaKnown RBP eCLIP12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 SPINK14Q6IE38 97 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 ERASQ7Z444 233 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 NPEPL1Q8NDH3 523 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 COMMD5Q9GZQ3 224 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 LAT2Q9GZY6 243 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 TMEM38AQ9H6F2 299 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 TNFRSF12AQ9NP84 129 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 FOXJ3Q9UPW0 622 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 IGKV3-7A0A075B6H7 116 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 ZNF785A8K8V0 405 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 C3orf80F5H4A9 247 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 IL5P05113 134 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 PATE4P0C8F1 98 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 OTX1P32242 354 aaPredicted RBP12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 SLC35D3Q5M8T2 416 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 SMIM19Q96E16 107 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 MT-CO3P00414 261 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 SPCS3P61009 180 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 TRAT1Q6PIZ9 186 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 DND1Q8IYX4 353 aaKnown RBP12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 CCR5P51681 352 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 TMEM128Q5BJH2 165 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 HES3Q5TGS1 186 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 PRSS41Q7RTY9 318 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 C1orf210Q8IVY1 113 aa12.9□□□□□ -0.34
RAB11FIP1-201ENST00000287263 LAMB4A4D0S4 1761 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 TRIP6Q15654 476 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 MPV17LQ2QL34 196 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 LHX8Q68G74 356 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 RBM38Q9H0Z9 239 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 POLDIP2Q9Y2S7 368 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 PRSS37A4D1T9 235 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 ERVFRD-1P60508 538 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 B3GNTL1Q67FW5 361 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 ARHGEF39Q8N4T4 335 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 TMEM229BQ8NBD8 167 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 OR2V1Q8NHB1 315 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 KTI12Q96EK9 354 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 ST3GAL6Q9Y274 331 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 A0A1B0GV72 72 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 HPXP02790 462 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 GPX2P18283 190 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 IER3P46695 156 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 SURF2Q15527 256 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 IGHV5-51A0A0C4DH38 117 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 ADAM20O43506 726 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 HAND1O96004 215 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 CDK5R1Q15078 307 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 ELFN2Q5R3F8 820 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 OR1L4Q8NGR5 311 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 OPN3Q9H1Y3 402 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 C9orf170A2RU37 121 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 H0YIG0 161 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 H3BQ15 152 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 PPICP45877 212 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 BSXQ3C1V8 233 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 TMEM92Q6UXU6 159 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 RFESDQ8TAC1 157 aa12.89□□□□□ -0.35
RAB11FIP1-201ENST00000287263 LOC107984156A0A0G2JMH3 177 aa12.88□□□□□ -0.35
RAB11FIP1-201ENST00000287263 ERVH48-1M5A8F1 160 aa12.88□□□□□ -0.35
RAB11FIP1-201ENST00000287263 ARL17AQ8IVW1 177 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms