RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 EGLN1Q9GZT9 426 aa14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 ZNF835Q9Y2P0 537 aa14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 ZFC3H1O60293 1989 aaKnown RBP14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 LINC00587B1AMM8 73 aa14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 OR10J1P30954 320 aa14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 CSN1S1P47710 185 aa14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 C16orf47Q6ZP98 133 aaPredicted RBP14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 SLC2A9Q9NRM0 540 aa14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 ERRFI1Q9UJM3 462 aaPredicted RBP14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 CXorf51AA0A1B0GTR3 108 aa14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 HEXAP06865 529 aa14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 TMEM33P57088 247 aa14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 ERHP84090 104 aaKnown RBP14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 NAAAQ02083 359 aa14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 ELOVL1Q9BW60 279 aa14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 VN1R1Q9GZP7 353 aa14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 SEC16AO15027 2179 aa14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 HLA-DQB1P01920 261 aa14.65□□□□□ -0.07
SH3RF1-201ENST00000284637 C21orf58P58505 322 aa14.65□□□□□ -0.07
SH3RF1-201ENST00000284637 RAB35Q15286 201 aa14.65□□□□□ -0.07
SH3RF1-201ENST00000284637 COL5A1-AS1Q5SY13 56 aa14.65□□□□□ -0.07
SH3RF1-201ENST00000284637 Q6ZN92 141 aa14.65□□□□□ -0.07
SH3RF1-201ENST00000284637 KIAA1551Q9HCM1 1747 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 CDC14BO60729 498 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 ADH4P08319 380 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 OR5AC1P0C628 307 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 PRSS12P56730 875 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 ZNF385CQ66K41 422 aaPredicted RBP14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 REC114Q7Z4M0 266 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 OR2V1Q8NHB1 315 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 CLDN23Q96B33 292 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 TMEM9BQ9NQ34 198 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 ECM29Q5VYK3 1845 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 CRYM-AS1A6NIL9 109 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 SPINK4O60575 86 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 USF1P22415 310 aaPredicted RBP14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 GNRHR2Q96P88 292 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 ADAM11O75078 769 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 PIAS2O75928 621 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 CRYAAP02489 173 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 PET117Q6UWS5 81 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 OR10AC1Q8NH08 325 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 TAAR6Q96RI8 345 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 K7ERU9 68 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 DHRS3O75911 302 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 RPS4XP62701 263 aaKnown RBP14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 TMEM91Q6ZNR0 172 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 OR2C3Q8N628 320 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 EDARADDQ8WWZ3 215 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 Q9N2K0 584 aa14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 KLF13Q9Y2Y9 288 aaPredicted RBP14.64□□□□□ -0.07
SH3RF1-201ENST00000284637 CDK5RAP2Q96SN8 1893 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 DBX1A6NMT0 343 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 DEGS2Q6QHC5 323 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 LMO7DNF2Z398 122 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 OGG1O15527 345 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 LINC01565O15544 149 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 C1QCP02747 245 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 Q6ZS52 159 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 CXorf67Q86X51 503 aaPredicted RBP14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 C17orf78Q8N4C9 275 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 APOBEC3DQ96AK3 386 aaPredicted RBP14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 ALX4Q9H161 411 aaPredicted RBP14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 TLNRD1Q9H1K6 362 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 ZNF552Q9H707 407 aaPredicted RBP14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 FAM186AA6NE01 2351 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 LILRA5A6NI73 299 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 PGA3P0DJD8 388 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 GABRG2P18507 467 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 DGAT2L6Q6ZPD8 337 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 OR10V1Q8NGI7 309 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 ZNRF4Q8WWF5 429 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 FRRS1LQ9P0K9 344 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 LSM2Q9Y333 95 aaKnown RBP14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 MAP1LC3B2A6NCE7 125 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 ST8SIA5O15466 376 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 SKP2Q13309 424 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 WIPI1Q5MNZ9 446 aaPredicted RBP14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 ZADH2Q8N4Q0 377 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 ACY3Q96HD9 319 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 MAP1LC3BQ9GZQ8 125 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 NAA60Q9H7X0 242 aa14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 METTL1Q9UBP6 276 aaKnown RBP14.63□□□□□ -0.07
SH3RF1-201ENST00000284637 C3orf85A0A1B0GTC6 90 aa14.62□□□□□ -0.07
SH3RF1-201ENST00000284637 TTRP02766 147 aa14.62□□□□□ -0.07
SH3RF1-201ENST00000284637 BMP5P22003 454 aa14.62□□□□□ -0.07
SH3RF1-201ENST00000284637 DLK1P80370 383 aa14.62□□□□□ -0.07
SH3RF1-201ENST00000284637 FFAR4Q5NUL3 377 aa14.62□□□□□ -0.07
SH3RF1-201ENST00000284637 C1QL3Q5VWW1 255 aa14.62□□□□□ -0.07
SH3RF1-201ENST00000284637 ZNF774Q6NX45 483 aa14.62□□□□□ -0.07
SH3RF1-201ENST00000284637 TSEN54Q7Z6J9 526 aaKnown RBP14.62□□□□□ -0.07
SH3RF1-201ENST00000284637 FLRT3Q9NZU0 649 aa14.62□□□□□ -0.07
SH3RF1-201ENST00000284637 IGHV5-51A0A0C4DH38 117 aa14.62□□□□□ -0.07
SH3RF1-201ENST00000284637 MUC1P15941 1255 aaPredicted RBP14.62□□□□□ -0.07
SH3RF1-201ENST00000284637 DSCR4P56555 118 aaPredicted RBP14.62□□□□□ -0.07
SH3RF1-201ENST00000284637 PPP1CAP62136 330 aa14.62□□□□□ -0.07
SH3RF1-201ENST00000284637 MCHR2Q969V1 340 aa14.62□□□□□ -0.07
SH3RF1-201ENST00000284637 BCORQ6W2J9 1755 aa14.62□□□□□ -0.07
SH3RF1-201ENST00000284637 COL16A1Q07092 1604 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms