RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 KCNG3Q8TAE7 436 aa9.93□□□□□ -0.82
SCLT1-201ENST00000281142 MR1Q95460 341 aa9.93□□□□□ -0.82
SCLT1-201ENST00000281142 ZNF2Q9BSG1 426 aaPredicted RBP9.93□□□□□ -0.82
SCLT1-201ENST00000281142 FAM212BQ9NTI7 297 aaPredicted RBP9.93□□□□□ -0.82
SCLT1-201ENST00000281142 SOHLH2Q9NX45 425 aa9.93□□□□□ -0.82
SCLT1-201ENST00000281142 FBLN5Q9UBX5 448 aa9.93□□□□□ -0.82
SCLT1-201ENST00000281142 MCTS1Q9ULC4 181 aaKnown RBP9.93□□□□□ -0.82
SCLT1-201ENST00000281142 MEMO1Q9Y316 297 aa9.93□□□□□ -0.82
SCLT1-201ENST00000281142 LHFPL6Q9Y693 200 aa9.93□□□□□ -0.82
SCLT1-201ENST00000281142 URGCP-MRPS24S4R325 110 aa9.93□□□□□ -0.82
SCLT1-201ENST00000281142 KLK2P20151 261 aa9.93□□□□□ -0.82
SCLT1-201ENST00000281142 ZNF121P58317 390 aaPredicted RBP9.93□□□□□ -0.82
SCLT1-201ENST00000281142 NHLH2Q02577 135 aa9.93□□□□□ -0.82
SCLT1-201ENST00000281142 CRIP3Q6Q6R5 217 aa9.93□□□□□ -0.82
SCLT1-201ENST00000281142 SPNS3Q6ZMD2 512 aa9.93□□□□□ -0.82
SCLT1-201ENST00000281142 TMEM182Q6ZP80 229 aaPredicted RBP9.93□□□□□ -0.82
SCLT1-201ENST00000281142 TCTN2Q96GX1 697 aa9.93□□□□□ -0.82
SCLT1-201ENST00000281142 C5orf34Q96MH7 638 aa9.93□□□□□ -0.82
SCLT1-201ENST00000281142 YPEL4Q96NS1 127 aa9.93□□□□□ -0.82
SCLT1-201ENST00000281142 OR10A2Q9H208 303 aa9.93□□□□□ -0.82
SCLT1-201ENST00000281142 KCNJ16Q9NPI9 418 aa9.93□□□□□ -0.82
SCLT1-201ENST00000281142 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.93□□□□□ -0.822e-6■■■■□ 19.6
SCLT1-201ENST00000281142 POLR1DQ9Y2S0 133 aa9.93□□□□□ -0.82
SCLT1-201ENST00000281142 NCOA6Q14686 2063 aaPredicted RBP9.93□□□□□ -0.82
SCLT1-201ENST00000281142 FAM221BA6H8Z2 402 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 LILRA5A6NI73 299 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 FIGNL2A6NMB9 653 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 RER1O15258 196 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 SCGNO76038 276 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 NOVA1P51513 510 aaKnown RBP9.92□□□□□ -0.82
SCLT1-201ENST00000281142 HSF1Q00613 529 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 CHRFAM7AQ494W8 412 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 CARD17Q5XLA6 110 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 GRINAQ7Z429 371 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 C6orf201Q7Z4U5 140 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 OR1J1Q8NGS3 322 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 RHBDD1Q8TEB9 315 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 EMG1Q92979 244 aaKnown RBP9.92□□□□□ -0.82
SCLT1-201ENST00000281142 C1orf123Q9NWV4 160 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 WASF3Q9UPY6 502 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 C14orf166Q9Y224 244 aaKnown RBP9.92□□□□□ -0.82
SCLT1-201ENST00000281142 SHANK1Q9Y566 2161 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 IGHV5-51A0A0C4DH38 117 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 ZNF726A6NNF4 738 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 SNRPCP09234 159 aaKnown RBP9.92□□□□□ -0.82
SCLT1-201ENST00000281142 CXCL1P09341 107 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 TLE3Q04726 772 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 HAGHQ16775 308 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 DEGS2Q6QHC5 323 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 SHISA6Q6ZSJ9 500 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 DPPA2Q7Z7J5 298 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 FAM213BQ8TBF2 198 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 ADAMTS18Q8TE60 1221 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 THAP3Q8WTV1 239 aaPredicted RBP9.92□□□□□ -0.82
SCLT1-201ENST00000281142 HPSE2Q8WWQ2 592 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 TOMM40LQ969M1 308 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 TP53TG5Q9Y2B4 290 aa9.92□□□□□ -0.82
SCLT1-201ENST00000281142 IGHV1OR21-1A0A087WYE8 117 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 TSTD3H0UI37 97 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 ADAM10O14672 748 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 IFNA10P01566 189 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 APOBEC1P41238 236 aaKnown RBP9.91□□□□□ -0.82
SCLT1-201ENST00000281142 CAPZBP47756 277 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 SLC35A1P78382 337 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 HLA-DQA1Q5Y7H0 255 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 DNM1P34Q6PK57 102 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 FAM57BQ71RH2 274 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 KDF1Q8NAX2 398 aaPredicted RBP9.91□□□□□ -0.82
SCLT1-201ENST00000281142 SCGB3A2Q96PL1 93 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 NUDT16L1Q9BRJ7 211 aaKnown RBP9.91□□□□□ -0.82
SCLT1-201ENST00000281142 PECRQ9BY49 303 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 GPR61Q9BZJ8 451 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 SLC35B3Q9H1N7 401 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 ELL3Q9HB65 397 aaPredicted RBP9.91□□□□□ -0.82
SCLT1-201ENST00000281142 IGHV3-20A0A0C4DH32 117 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 CDRT15L2A8MXV6 281 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 TMEM150CB9EJG8 249 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 F10P00742 488 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 SOD3P08294 240 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 RRADP55042 308 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 UCP2P55851 309 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 CFHR1Q03591 330 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 KHDC3LQ587J8 217 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 LYZL2Q7Z4W2 148 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 SULF2Q8IWU5 870 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 OR52M1Q8NGK5 317 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 MRPL37Q9BZE1 423 aaKnown RBP9.91□□□□□ -0.82
SCLT1-201ENST00000281142 TUBD1Q9UJT1 453 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 STMND1H3BQB6 276 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 MAS1LP35410 378 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 ZNF84P51523 738 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 RAP1AP62834 184 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 OR8G1Q15617 311 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 IFI44Q8TCB0 444 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 DYRK2Q92630 601 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 WWTR1Q9GZV5 400 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 ARV1Q9H2C2 271 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 LUZP4Q9P127 313 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 HS3ST3B1Q9Y662 390 aa9.91□□□□□ -0.82
SCLT1-201ENST00000281142 UNC13CQ8NB66 2214 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms