RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 PEBP4Q96S96 227 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 FAM173AQ9BQD7 235 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 HES7Q9BYE0 225 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 SIAEQ9HAT2 523 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 MEPEQ9NQ76 525 aaPredicted RBP3.74□□□□□ -1.81
CD44-202ENST00000278385 EHFQ9NZC4 300 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 GNPTGQ9UJJ9 305 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 ING4Q9UNL4 249 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 NTNG1Q9Y2I2 539 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 GOLT1BQ9Y3E0 138 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 L3MBTL1Q9Y468 752 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 SELENOKQ9Y6D0 94 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 MYH10P35580 1976 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 THADAQ6YHU6 1953 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 MYO16Q9Y6X6 1858 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 DNAH14Q0VDD8 3507 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 IGKV2D-30A0A075B6S6 120 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 IGLV9-49A0A0B4J1Y8 123 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 MEIOCA2RUB1 952 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 MIF4GDA9UHW6 222 aaKnown RBP3.73□□□□□ -1.81
CD44-202ENST00000278385 SMKR1H3BMG3 65 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 TNFRSF13BO14836 293 aaPredicted RBP3.73□□□□□ -1.81
CD44-202ENST00000278385 UBDO15205 165 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 TYROBPO43914 113 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 NOS1APO75052 506 aaPredicted RBP3.73□□□□□ -1.81
CD44-202ENST00000278385 SMIM24O75264 130 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 PROSCO94903 275 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 NTN1O95631 604 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 TBX6O95947 436 aaPredicted RBP3.73□□□□□ -1.81
CD44-202ENST00000278385 PPBPP02775 128 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 MT-ND4P03905 459 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 PRSS2P07478 247 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 CST2P09228 141 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 OR8U9P0C7N5 309 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 CTSEP14091 401 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 RPL35AP18077 110 aaKnown RBP3.73□□□□□ -1.81
CD44-202ENST00000278385 ALOX5APP20292 161 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 F8A1P23610 371 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 PMELP40967 661 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 GLP1RP43220 463 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 GSSP48637 474 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 ATP4BP51164 291 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 FOXG1P55316 489 aaPredicted RBP3.73□□□□□ -1.81
CD44-202ENST00000278385 RBX1P62877 108 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 SLC25A11Q02978 314 aaKnown RBP3.73□□□□□ -1.81
CD44-202ENST00000278385 SLC10A7Q0GE19 358 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 SKP2Q13309 424 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 ZNF235Q14590 738 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 NFATC4Q14934 902 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 PAFAH1B3Q15102 231 aaKnown RBP3.73□□□□□ -1.81
CD44-202ENST00000278385 ELOCQ15369 112 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 TRIP13Q15645 432 aaPredicted RBP3.73□□□□□ -1.81
CD44-202ENST00000278385 ATP6AP1Q15904 470 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 HES3Q5TGS1 186 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 C9orf47Q6ZRZ4 202 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 SLC36A1Q7Z2H8 476 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 ISCA2Q86U28 154 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 NIT1Q86X76 327 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 DHFR2Q86XF0 187 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 GKN2Q86XP6 184 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 SLC30A8Q8IWU4 369 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 KIRREL3Q8IZU9 778 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 ATPAF2Q8N5M1 289 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 NPWQ8N729 165 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 ZNF383Q8NA42 475 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 GPR32P1Q8NGA4 272 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 OR4D10Q8NGI6 311 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 OR8U1Q8NH10 309 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 ZNF564Q8TBZ8 553 aaPredicted RBP3.73□□□□□ -1.81
CD44-202ENST00000278385 LMX1AQ8TE12 382 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 C16orf78Q8WTQ4 265 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 TRUB1Q8WWH5 349 aaKnown RBP3.73□□□□□ -1.81
CD44-202ENST00000278385 EEF1AKMT3Q96AZ1 226 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 CMTM7Q96FZ5 175 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 POM121L2Q96KW2 1035 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 RILPQ96NA2 401 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 NODALQ96S42 347 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 PHB2Q99623 299 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 GPR21Q99679 349 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 PDCD1LG2Q9BQ51 273 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 SLC25A33Q9BSK2 321 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 PLEKHA3Q9HB20 300 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 ELL3Q9HB65 397 aaPredicted RBP3.73□□□□□ -1.81
CD44-202ENST00000278385 ZBTB20Q9HC78 741 aaPredicted RBP3.73□□□□□ -1.81
CD44-202ENST00000278385 ZNF446Q9NWS9 450 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 TAS2R16Q9NYV7 291 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 TREM2Q9NZC2 230 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 GLTPQ9NZD2 209 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 CIDEBQ9UHD4 219 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 CD84Q9UIB8 345 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 FBXO5Q9UKT4 447 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 TP53TG1Q9Y2A0 90 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 KLF12Q9Y4X4 402 aa3.73□□□□□ -1.81
CD44-202ENST00000278385 MYO18AQ92614 2054 aaKnown RBP3.73□□□□□ -1.81
CD44-202ENST00000278385 EML5Q05BV3 1969 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 PCDH15Q96QU1 1955 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 PLXND1Q9Y4D7 1925 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 CKAP5Q14008 2032 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 ZNF816-ZNF321PA0A0X1KG74 233 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 TMX2-CTNND1H3BSU7 103 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms