RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 CSF2RBP32927 897 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 HMGA2P52926 109 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 LSM11P83369 360 aaKnown RBP eCLIP10.17□□□□□ -0.78
USP53-201ENST00000274030 PSG6Q00889 435 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 PAX5Q02548 391 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 ZIC1Q15915 447 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 ZNF425Q6IV72 752 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 LSM2Q9Y333 95 aaKnown RBP10.17□□□□□ -0.78
USP53-201ENST00000274030 C9orf170A2RU37 121 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 PHOX2AO14813 284 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 SPINT1O43278 529 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 ADAP1O75689 374 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 PMCHP20382 165 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 MAGEA5P43359 124 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 KLF3P57682 345 aaPredicted RBP10.16□□□□□ -0.78
USP53-201ENST00000274030 SLC38A11Q08AI6 406 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 PJVKQ0ZLH3 352 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 GGNBP1Q5YKI7 109 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 OR2W3Q7Z3T1 314 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 TGIF2LXQ8IUE1 241 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 TUSC5Q8IXB3 177 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 PDCD6O75340 191 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 IGHA1P01876 353 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 GYPAP02724 150 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 POU2F2P09086 479 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 SELENOPP49908 381 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 FGF8P55075 233 aaPredicted RBP10.16□□□□□ -0.78
USP53-201ENST00000274030 TMEM108Q6UXF1 575 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 TMEM56Q96MV1 263 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 HSD17B10Q99714 261 aaKnown RBP10.16□□□□□ -0.78
USP53-201ENST00000274030 GLI3P10071 1580 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 AGFG2O95081 481 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 SFT2D2O95562 160 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 HRASP01112 189 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 C1QAP02745 245 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 TIAL1Q01085 375 aaKnown RBP eCLIP10.16□□□□□ -0.78
USP53-201ENST00000274030 COMMD1Q8N668 190 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 ZDHHC22Q8N966 263 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 TMIGD3P0DMS9 266 aaPredicted RBP10.16□□□□□ -0.78
USP53-201ENST00000274030 MESTQ5EB52 335 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 M1APQ8TC57 530 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 VSTM2LQ96N03 204 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 NEURL2Q9BR09 285 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 SLC26A1Q9H2B4 701 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 SLC25A22Q9H936 323 aa10.16□□□□□ -0.78
USP53-201ENST00000274030 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.16□□□□□ -0.78
USP53-201ENST00000274030 SH2D7A6NKC9 451 aaPredicted RBP10.15□□□□□ -0.78
USP53-201ENST00000274030 FFAR1O14842 300 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 SMIM17P0DL12 118 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 C10orf111Q8N326 155 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 BCL2L2Q92843 193 aaPredicted RBP10.15□□□□□ -0.78
USP53-201ENST00000274030 TMPRSS5Q9H3S3 457 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 TCFL5Q9UL49 500 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 TMED3Q9Y3Q3 217 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 ST8SIA5O15466 376 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 HSBP1O75506 76 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 PTTG1IPP53801 180 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 FAM219AQ8IW50 185 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 ABHD14AQ9BUJ0 271 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 UCK1Q9HA47 277 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 GP1BAP07359 652 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 GPR137Q96N19 417 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 TRAV39A0A0B4J263 110 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 A0A1W2PNV4 684 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 TMPRSS2O15393 492 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 SLC25A5P05141 298 aaKnown RBP10.15□□□□□ -0.78
USP53-201ENST00000274030 FBP1P09467 338 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 SUMO1P63165 101 aaKnown RBP10.15□□□□□ -0.78
USP53-201ENST00000274030 MRM1Q6IN84 353 aaKnown RBP10.15□□□□□ -0.78
USP53-201ENST00000274030 NPEPL1Q8NDH3 523 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 TMEM18Q96B42 140 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 CDX2Q99626 313 aaPredicted RBP10.15□□□□□ -0.78
USP53-201ENST00000274030 AAMDCQ9H7C9 122 aa10.15□□□□□ -0.78
USP53-201ENST00000274030 CST4P01036 141 aa10.15□□□□□ -0.79
USP53-201ENST00000274030 CD300CQ08708 224 aa10.15□□□□□ -0.79
USP53-201ENST00000274030 FNDC7Q5VTL7 733 aa10.15□□□□□ -0.79
USP53-201ENST00000274030 DEGS2Q6QHC5 323 aa10.15□□□□□ -0.79
USP53-201ENST00000274030 ETV3LQ6ZN32 361 aa10.15□□□□□ -0.79
USP53-201ENST00000274030 UCN2Q96RP3 112 aa10.15□□□□□ -0.79
USP53-201ENST00000274030 LRRC3CA6NJW4 275 aa10.14□□□□□ -0.79
USP53-201ENST00000274030 SOCS1O15524 211 aa10.14□□□□□ -0.79
USP53-201ENST00000274030 POLR2GP62487 172 aaKnown RBP eCLIP10.14□□□□□ -0.79
USP53-201ENST00000274030 HLXQ14774 488 aaPredicted RBP10.14□□□□□ -0.79
USP53-201ENST00000274030 ABHD3Q8WU67 409 aa10.14□□□□□ -0.79
USP53-201ENST00000274030 ASB10Q8WXI3 467 aa10.14□□□□□ -0.79
USP53-201ENST00000274030 NAGKQ9UJ70 344 aa10.14□□□□□ -0.79
USP53-201ENST00000274030 WSB1Q9Y6I7 421 aa10.14□□□□□ -0.79
USP53-201ENST00000274030 ORM2P19652 201 aa10.14□□□□□ -0.79
USP53-201ENST00000274030 OR2Y1Q8NGV0 311 aa10.14□□□□□ -0.79
USP53-201ENST00000274030 SLC17A5Q9NRA2 495 aa10.14□□□□□ -0.79
USP53-201ENST00000274030 FRRS1LQ9P0K9 344 aa10.14□□□□□ -0.79
USP53-201ENST00000274030 TRAPPC4Q9Y296 219 aa10.14□□□□□ -0.79
USP53-201ENST00000274030 TRIP11Q15643 1979 aa10.14□□□□□ -0.79
USP53-201ENST00000274030 CDIPTO14735 213 aa10.14□□□□□ -0.79
USP53-201ENST00000274030 MPC2O95563 127 aa10.14□□□□□ -0.79
USP53-201ENST00000274030 CCL3P10147 92 aa10.14□□□□□ -0.79
USP53-201ENST00000274030 RAC3P60763 192 aa10.14□□□□□ -0.79
USP53-201ENST00000274030 ZNF66Q6ZN08 573 aa10.14□□□□□ -0.79
USP53-201ENST00000274030 ZNF561Q8N587 486 aa10.14□□□□□ -0.79
USP53-201ENST00000274030 MAP6Q96JE9 813 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms