RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 C1orf61Q13536 156 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 TMEM187Q14656 261 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 SSPNQ14714 243 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 KISS1Q15726 138 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 COL13A1Q5TAT6 717 aaPredicted RBP13.11□□□□□ -0.31
XRCC1-201ENST00000262887 LYZL2Q7Z4W2 148 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 CYB561D1Q8N8Q1 229 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 ZFP62Q8NB50 900 aaPredicted RBP13.11□□□□□ -0.31
XRCC1-201ENST00000262887 OR13H1Q8NG92 308 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 NUDT22Q9BRQ3 303 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 LHFPL6Q9Y693 200 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 CFAP54Q96N23 3096 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 CDRT15L2A8MXV6 281 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 EREGO14944 169 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 ST8SIA3O43173 380 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 ZNF25P17030 456 aaPredicted RBP13.11□□□□□ -0.31
XRCC1-201ENST00000262887 YPEL5P62699 121 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 TMEM176BQ3YBM2 270 aaPredicted RBP13.11□□□□□ -0.31
XRCC1-201ENST00000262887 FBXW12Q6X9E4 464 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 C6orf201Q7Z4U5 140 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 MVB12AQ96EY5 273 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 FAM210BQ96KR6 192 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 HIST1H2BLQ99880 126 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 ABHD14AQ9BUJ0 271 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 CFHR5Q9BXR6 569 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 ZNF700Q9H0M5 742 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 ELL3Q9HB65 397 aaPredicted RBP13.11□□□□□ -0.31
XRCC1-201ENST00000262887 CRLF2Q9HC73 371 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 TCFL5Q9UL49 500 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 MCTS1Q9ULC4 181 aaKnown RBP13.11□□□□□ -0.31
XRCC1-201ENST00000262887 QDPRP09417 244 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 COTL1Q14019 142 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 OR52M1Q8NGK5 317 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 REEP6Q96HR9 211 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 GABRG3Q99928 467 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 NAA60Q9H7X0 242 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 CHST11Q9NPF2 352 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 FOXD3Q9UJU5 478 aaPredicted RBP13.1□□□□□ -0.31
XRCC1-201ENST00000262887 RFNGQ9Y644 331 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 B4DGG1 531 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 PHOX2AO14813 284 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 TOX3O15405 576 aaPredicted RBP13.1□□□□□ -0.31
XRCC1-201ENST00000262887 CYTIPO60759 359 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 DUSP1P28562 367 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 AKT2P31751 481 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 ICAM4Q14773 271 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 ARL6IP1Q15041 203 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 ABCA11PQ4W5N1 156 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 FAM57BQ71RH2 274 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 DOK3Q7L591 496 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 SLC35E3Q7Z769 313 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 SSC4DQ8WTU2 575 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 TMEM234Q8WY98 164 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 R3HDM4Q96D70 268 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 HDHD3Q9BSH5 251 aaPredicted RBP13.1□□□□□ -0.31
XRCC1-201ENST00000262887 DECR2Q9NUI1 292 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 SOHLH2Q9NX45 425 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 AK3Q9UIJ7 227 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 WSB1Q9Y6I7 421 aa13.1□□□□□ -0.31
XRCC1-201ENST00000262887 NPIPB13A6NJU9 1138 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 NPIPB4C9JG80 1138 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 SCAF4O95104 1147 aaKnown RBP13.09□□□□□ -0.31
XRCC1-201ENST00000262887 HSPB1P04792 205 aaKnown RBP13.09□□□□□ -0.31
XRCC1-201ENST00000262887 TMEM225BP0DP42 221 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 GLI4P10075 376 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 ATP6V0CP27449 155 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 TNFRSF4P43489 277 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 EWSR1Q01844 656 aaKnown RBP eCLIP13.09□□□□□ -0.31
XRCC1-201ENST00000262887 C4orf17Q53FE4 359 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 OGFOD3Q6PK18 319 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 C1orf87Q8N0U7 546 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 SLC22A18ASQ8N1D0 253 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 RTN4IP1Q8WWV3 396 aaPredicted RBP13.09□□□□□ -0.31
XRCC1-201ENST00000262887 WWTR1Q9GZV5 400 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 PLEKHJ1Q9NW61 149 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 GOLT1BQ9Y3E0 138 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 A0A087WZY1 265 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 C9J4A7 227 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 GABRR1P24046 479 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 OR1D4P47884 311 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 GNG10P50151 68 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 ZNF266Q14584 549 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 THEM4Q5T1C6 240 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 TSPO2Q5TGU0 170 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 RTL6Q6ICC9 239 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 RIMS4Q9H426 269 aaPredicted RBP13.09□□□□□ -0.31
XRCC1-201ENST00000262887 ANXA10Q9UJ72 324 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 CYP8B1Q9UNU6 501 aa13.09□□□□□ -0.31
XRCC1-201ENST00000262887 FAM230AA0A1W2PPH8 454 aa13.08□□□□□ -0.31
XRCC1-201ENST00000262887 TGOLN2O43493 480 aa13.08□□□□□ -0.31
XRCC1-201ENST00000262887 KLF8O95600 359 aaPredicted RBP13.08□□□□□ -0.31
XRCC1-201ENST00000262887 CTSEP14091 401 aa13.08□□□□□ -0.31
XRCC1-201ENST00000262887 FGF7P21781 194 aa13.08□□□□□ -0.31
XRCC1-201ENST00000262887 CDAP32320 146 aa13.08□□□□□ -0.31
XRCC1-201ENST00000262887 GABREP78334 506 aa13.08□□□□□ -0.31
XRCC1-201ENST00000262887 FZD2Q14332 565 aa13.08□□□□□ -0.31
XRCC1-201ENST00000262887 GNMTQ14749 295 aa13.08□□□□□ -0.31
XRCC1-201ENST00000262887 ZNF506Q5JVG8 444 aa13.08□□□□□ -0.31
XRCC1-201ENST00000262887 ZNF283Q8N7M2 679 aa13.08□□□□□ -0.31
XRCC1-201ENST00000262887 PLPP5Q8NEB5 264 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms