RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 MBTPS2O43462 519 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 BCL3P20749 454 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 SUMO3P55854 103 aaPredicted RBP12.74□□□□□ -0.37
CUX2-201ENST00000261726 TCTEX1D1Q8N7M0 179 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 C19orf43Q9BQ61 176 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 LGALS7P47929 136 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 GUSBP11Q6P575 273 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 TEX261Q6UWH6 196 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 DUSP18Q8NEJ0 188 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 SMIM4Q8WVI0 70 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 OR10C1Q96KK4 312 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 FGF20Q9NP95 211 aaPredicted RBP12.74□□□□□ -0.37
CUX2-201ENST00000261726 MMP26Q9NRE1 261 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 WSB1Q9Y6I7 421 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 TRAV17A0A0B4J275 112 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 CD96P40200 585 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 RPL29P47914 159 aaKnown RBP12.74□□□□□ -0.37
CUX2-201ENST00000261726 RPL24P83731 157 aaKnown RBP12.74□□□□□ -0.37
CUX2-201ENST00000261726 SSBP1Q04837 148 aaKnown RBP12.74□□□□□ -0.37
CUX2-201ENST00000261726 OTUD1Q5VV17 481 aaPredicted RBP12.74□□□□□ -0.37
CUX2-201ENST00000261726 GLDNQ6ZMI3 551 aaPredicted RBP12.74□□□□□ -0.37
CUX2-201ENST00000261726 WFDC3Q8IUB2 231 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 UBTD1Q9HAC8 227 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 PDFQ9HBH1 243 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 RASL12Q9NYN1 266 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 PRSS12P56730 875 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 Q6ZS52 159 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 PTOV1Q86YD1 416 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 THYN1Q9P016 225 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 A0A0A6YYD5 115 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 KIR2DS2P43631 304 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 TCL1AP56279 114 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 RNPS1Q15287 305 aaKnown RBP12.73□□□□□ -0.37
CUX2-201ENST00000261726 OR10G4Q8NGN3 311 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 OR10G9Q8NGN4 311 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 OR10G7Q8NGN6 311 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 OR13G1Q8NGZ3 307 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 FLYWCH2Q96CP2 140 aaKnown RBP12.73□□□□□ -0.37
CUX2-201ENST00000261726 MRPL37Q9BZE1 423 aaKnown RBP12.73□□□□□ -0.37
CUX2-201ENST00000261726 TNFRSF12AQ9NP84 129 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 SLC7A10Q9NS82 523 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 LY86O95711 162 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 KLF3P57682 345 aaPredicted RBP12.73□□□□□ -0.37
CUX2-201ENST00000261726 WDR38Q5JTN6 314 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 GPX7Q96SL4 187 aaPredicted RBP12.73□□□□□ -0.37
CUX2-201ENST00000261726 MTCH2Q9Y6C9 303 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 HMX2A2RU54 273 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 APELAP0DMC3 54 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 ZNF117Q03924 483 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 FUT7Q11130 342 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 UBALD2Q8IYN6 164 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 NT5CQ8TCD5 201 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 SPSB1Q96BD6 273 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 IGFBP6P24592 240 aaPredicted RBP12.73□□□□□ -0.37
CUX2-201ENST00000261726 TMEM196Q5HYL7 178 aa12.73□□□□□ -0.37
CUX2-201ENST00000261726 GPR3P46089 330 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 PABPC1L2AQ5JQF8 200 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 PDPNQ86YL7 162 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 FAM24BQ8N5W8 94 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 MYEOVQ96EZ4 313 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 LYRM2Q9NU23 88 aaPredicted RBP12.72□□□□□ -0.37
CUX2-201ENST00000261726 COL13A1Q5TAT6 717 aaPredicted RBP12.72□□□□□ -0.37
CUX2-201ENST00000261726 TMEM108Q6UXF1 575 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 RIMKLAQ8IXN7 391 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 OR1L1Q8NH94 360 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 CST4P01036 141 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 TRAT1Q6PIZ9 186 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 TIPARPQ7Z3E1 657 aaKnown RBP12.72□□□□□ -0.37
CUX2-201ENST00000261726 SLC26A10Q8NG04 563 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 RAB1BQ9H0U4 201 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 ARRDC5A6NEK1 342 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 ORM1P02763 201 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 PTGFRP43088 359 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 FZD5Q13467 585 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 ARRDC1Q8N5I2 433 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 OR5R1Q8NH85 324 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 TMED3Q9Y3Q3 217 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 PHIPQ8WWQ0 1821 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 ZNF205O95201 554 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 OR5AC1P0C628 307 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 HIST1H1DP16402 221 aaKnown RBP12.72□□□□□ -0.37
CUX2-201ENST00000261726 ZNF32P17041 273 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 SNRPEP62304 92 aaKnown RBP12.72□□□□□ -0.37
CUX2-201ENST00000261726 INSL4Q14641 139 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 MCHR2Q969V1 340 aa12.72□□□□□ -0.37
CUX2-201ENST00000261726 EPPINO95925 133 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 PATE4P0C8F1 98 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 OR3A1P47881 315 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 RPS4XP62701 263 aaKnown RBP12.71□□□□□ -0.37
CUX2-201ENST00000261726 UBE2L3P68036 154 aaKnown RBP12.71□□□□□ -0.37
CUX2-201ENST00000261726 HOXA4Q00056 320 aaPredicted RBP12.71□□□□□ -0.37
CUX2-201ENST00000261726 CRISPLD2Q9H0B8 497 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 hADV38S2A0JD32 116 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 F2RL2O00254 374 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 TMPRSS2O15393 492 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 Q6ZN92 141 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 LINC00052Q96N35 136 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 RAB40CQ96S21 281 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 ACP1P24666 158 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 C21orf58P58505 322 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms