RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 GAGE1Q13065 139 aa16.52■□□□□ 0.24
COL4A3BP-201ENST00000261415 C3AR1Q16581 482 aa16.52■□□□□ 0.24
COL4A3BP-201ENST00000261415 WDFY1Q8IWB7 410 aa16.52■□□□□ 0.24
COL4A3BP-201ENST00000261415 PRSS35Q8N3Z0 413 aa16.52■□□□□ 0.24
COL4A3BP-201ENST00000261415 BPIFB2Q8N4F0 458 aa16.52■□□□□ 0.24
COL4A3BP-201ENST00000261415 COMMD1Q8N668 190 aa16.52■□□□□ 0.24
COL4A3BP-201ENST00000261415 ZNF610Q8N9Z0 462 aa16.52■□□□□ 0.24
COL4A3BP-201ENST00000261415 SECTM1Q8WVN6 248 aa16.52■□□□□ 0.24
COL4A3BP-201ENST00000261415 PELI1Q96FA3 418 aa16.52■□□□□ 0.24
COL4A3BP-201ENST00000261415 GALNT14Q96FL9 552 aa16.52■□□□□ 0.24
COL4A3BP-201ENST00000261415 PRSS37A4D1T9 235 aa16.52■□□□□ 0.23
COL4A3BP-201ENST00000261415 PIN1P1O15428 100 aa16.52■□□□□ 0.23
COL4A3BP-201ENST00000261415 WISP2O76076 250 aa16.52■□□□□ 0.23
COL4A3BP-201ENST00000261415 RENP00797 406 aa16.52■□□□□ 0.23
COL4A3BP-201ENST00000261415 HLA-AP01891 365 aaKnown RBP16.52■□□□□ 0.23
COL4A3BP-201ENST00000261415 FGF7P21781 194 aa16.52■□□□□ 0.23
COL4A3BP-201ENST00000261415 EDNRAP25101 427 aa16.52■□□□□ 0.23
COL4A3BP-201ENST00000261415 BIDP55957 195 aa16.52■□□□□ 0.23
COL4A3BP-201ENST00000261415 HIST3H2BBQ8N257 126 aa16.52■□□□□ 0.23
COL4A3BP-201ENST00000261415 ROBO4Q8WZ75 1007 aa16.52■□□□□ 0.23
COL4A3BP-201ENST00000261415 SLC25A18Q9H1K4 315 aa16.52■□□□□ 0.23
COL4A3BP-201ENST00000261415 PHF3Q92576 2039 aaKnown RBP16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 TLN1Q9Y490 2541 aaKnown RBP16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 ARHGAP21Q5T5U3 1957 aa16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 A6NIZ1 184 aa16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 CCSO14618 274 aa16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 RAB3DO95716 219 aa16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 PTBP3O95758 552 aaKnown RBP16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 SPARCP09486 303 aa16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 PRSS3P35030 304 aa16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 RAP1BP61224 184 aa16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 SLC17A1Q14916 467 aa16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 TP53I3Q53FA7 332 aa16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 ABLIM2Q6H8Q1 611 aa16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 OR2A2Q6IF42 318 aa16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 EXD3Q8N9H8 876 aa16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 POM121Q96HA1 1249 aa16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 WDYHV1Q96HA8 205 aa16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 TSSK2Q96PF2 358 aa16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 EMC6Q9BV81 110 aa16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 PLSCR2Q9NRY7 297 aa16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 MAP1BP46821 2468 aaKnown RBP16.51■□□□□ 0.23
COL4A3BP-201ENST00000261415 GLCEO94923 617 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 ARG1P05089 322 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 OR8G3PP0DMU2 310 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 LPAR6P43657 344 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 SLC25A1P53007 311 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 CYCSP99999 105 aaKnown RBP16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 ZNF585AQ6P3V2 769 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 GABRG1Q8N1C3 465 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 OR9K2Q8NGE7 335 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 OR51L1Q8NGJ5 315 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 ST7LQ8TDW4 575 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 PHB2Q99623 299 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 SF3B5Q9BWJ5 86 aaKnown RBP16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 TUBD1Q9UJT1 453 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 NPIPA2E9PIF3 369 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 NPIPA3F8WFD2 350 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 DCTN6O00399 190 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 AQP7O14520 342 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 CRHP06850 196 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 DAOP14920 347 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 KHDC3LQ587J8 217 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 SAPCD1Q5SSQ6 148 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 ANKRD16Q6P6B7 361 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 LYG2Q86SG7 212 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 TMEM229BQ8NBD8 167 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 TERB2Q8NHR7 220 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 ZNRF4Q8WWF5 429 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 YPEL4Q96NS1 127 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 KCNK17Q96T54 332 aa16.5■□□□□ 0.23
COL4A3BP-201ENST00000261415 ZNF724A8MTY0 619 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 OR2C1O95371 312 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 ZNF25P17030 456 aaPredicted RBP16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 SULT1A2P50226 295 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 ZNF84P51523 738 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 PLA2G7Q13093 441 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 PEG10Q86TG7 708 aaKnown RBP16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 MITD1Q8WV92 249 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 DOCK7Q96N67 2140 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 ZNF716A6NP11 495 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 CYTIPO60759 359 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 ADAP1O75689 374 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 OR2T7P0C7T2 308 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 CLDN17P56750 224 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 NKX6-1P78426 367 aaPredicted RBP16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 DCXRQ7Z4W1 244 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 GPR137CQ8N3F9 429 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 OR10AD1Q8NGE0 317 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 OR2T27Q8NH04 317 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 OR8S1Q8NH09 359 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 ZNF385AQ96PM9 386 aaKnown RBP16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 PDCD1LG2Q9BQ51 273 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 SRA1Q9HD15 236 aaKnown RBP16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 KCNG2Q9UJ96 466 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 ZNF281Q9Y2X9 895 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 FREM1Q5H8C1 2179 aa16.49■□□□□ 0.23
COL4A3BP-201ENST00000261415 A0A1W2PPE2 198 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 AGPAT2O15120 278 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 PLXDC2Q6UX71 529 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms