RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 ETFDHQ16134 617 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 OR13D1Q8NGV5 346 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 RAB33BQ9H082 229 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 ZNF71Q9NQZ8 489 aaPredicted RBP16.78■□□□□ 0.28
PTPRE-201ENST00000254667 SHANK3Q9BYB0 1731 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 TRAV38-1A0A0B4J264 116 aa16.77■□□□□ 0.28
PTPRE-201ENST00000254667 PATE4P0C8F1 98 aa16.77■□□□□ 0.28
PTPRE-201ENST00000254667 SPNP16150 400 aa16.77■□□□□ 0.28
PTPRE-201ENST00000254667 CNN1P51911 297 aaKnown RBP16.77■□□□□ 0.28
PTPRE-201ENST00000254667 TAGLNQ01995 201 aaKnown RBP16.77■□□□□ 0.28
PTPRE-201ENST00000254667 SURF2Q15527 256 aaPredicted RBP16.77■□□□□ 0.28
PTPRE-201ENST00000254667 ZNF721Q8TF20 911 aa16.77■□□□□ 0.28
PTPRE-201ENST00000254667 ACY3Q96HD9 319 aa16.77■□□□□ 0.28
PTPRE-201ENST00000254667 CYB5R1Q9UHQ9 305 aa16.77■□□□□ 0.28
PTPRE-201ENST00000254667 NCBP2LA6PVI3 153 aaKnown RBP16.77■□□□□ 0.28
PTPRE-201ENST00000254667 FCGR3BO75015 233 aa16.77■□□□□ 0.28
PTPRE-201ENST00000254667 CBR1P16152 277 aa16.77■□□□□ 0.28
PTPRE-201ENST00000254667 ZNF501Q96CX3 271 aaPredicted RBP16.77■□□□□ 0.28
PTPRE-201ENST00000254667 UBE2L5PA0A1B0GUS4 154 aa16.77■□□□□ 0.28
PTPRE-201ENST00000254667 TLE1Q04724 770 aa16.77■□□□□ 0.28
PTPRE-201ENST00000254667 OR2M7Q8NG81 312 aa16.77■□□□□ 0.28
PTPRE-201ENST00000254667 TRMT61AQ96FX7 289 aaKnown RBP16.77■□□□□ 0.28
PTPRE-201ENST00000254667 ZNF835Q9Y2P0 537 aa16.77■□□□□ 0.28
PTPRE-201ENST00000254667 PATE3B3GLJ2 98 aa16.77■□□□□ 0.27
PTPRE-201ENST00000254667 H3BP45 60 aa16.77■□□□□ 0.27
PTPRE-201ENST00000254667 PNPP00491 289 aa16.77■□□□□ 0.27
PTPRE-201ENST00000254667 PMP22Q01453 160 aa16.77■□□□□ 0.27
PTPRE-201ENST00000254667 SP6Q3SY56 376 aa16.77■□□□□ 0.27
PTPRE-201ENST00000254667 FAHD2BQ6P2I3 314 aaPredicted RBP16.77■□□□□ 0.27
PTPRE-201ENST00000254667 FAHD2AQ96GK7 314 aa16.77■□□□□ 0.27
PTPRE-201ENST00000254667 SLC35D1Q9NTN3 355 aa16.77■□□□□ 0.27
PTPRE-201ENST00000254667 ANKRD20A5PA0PJZ0 165 aa16.77■□□□□ 0.27
PTPRE-201ENST00000254667 CST7O76096 145 aa16.77■□□□□ 0.27
PTPRE-201ENST00000254667 ERGP11308 486 aa16.76■□□□□ 0.27
PTPRE-201ENST00000254667 CCL2P13500 99 aa16.76■□□□□ 0.27
PTPRE-201ENST00000254667 UCNP55089 124 aa16.76■□□□□ 0.27
PTPRE-201ENST00000254667 PPP1R1AQ13522 171 aa16.76■□□□□ 0.27
PTPRE-201ENST00000254667 PECRQ9BY49 303 aa16.76■□□□□ 0.27
PTPRE-201ENST00000254667 ICMTO60725 284 aa16.76■□□□□ 0.27
PTPRE-201ENST00000254667 S100A8P05109 93 aa16.76■□□□□ 0.27
PTPRE-201ENST00000254667 GNG10P50151 68 aa16.76■□□□□ 0.27
PTPRE-201ENST00000254667 GPR35Q9HC97 309 aa16.76■□□□□ 0.27
PTPRE-201ENST00000254667 CA10Q9NS85 328 aa16.76■□□□□ 0.27
PTPRE-201ENST00000254667 C9orf170A2RU37 121 aa16.76■□□□□ 0.27
PTPRE-201ENST00000254667 GSTZ1O43708 216 aaPredicted RBP16.76■□□□□ 0.27
PTPRE-201ENST00000254667 DUS4LO95620 317 aaKnown RBP16.76■□□□□ 0.27
PTPRE-201ENST00000254667 SELENOPP49908 381 aa16.76■□□□□ 0.27
PTPRE-201ENST00000254667 NCR3LG1Q68D85 454 aa16.76■□□□□ 0.27
PTPRE-201ENST00000254667 ZAR1Q86SH2 424 aa16.76■□□□□ 0.27
PTPRE-201ENST00000254667 OR5M8Q8NGP6 311 aa16.76■□□□□ 0.27
PTPRE-201ENST00000254667 Q3ZCU0 254 aa16.76■□□□□ 0.27
PTPRE-201ENST00000254667 RFESDQ8TAC1 157 aa16.76■□□□□ 0.27
PTPRE-201ENST00000254667 MAP6Q96JE9 813 aa16.76■□□□□ 0.27
PTPRE-201ENST00000254667 OR2H1Q9GZK4 316 aa16.76■□□□□ 0.27
PTPRE-201ENST00000254667 ADAM20O43506 726 aa16.75■□□□□ 0.27
PTPRE-201ENST00000254667 B3GALNT1O75752 331 aa16.75■□□□□ 0.27
PTPRE-201ENST00000254667 PTHLHP12272 177 aa16.75■□□□□ 0.27
PTPRE-201ENST00000254667 DEFA6Q01524 100 aa16.75■□□□□ 0.27
PTPRE-201ENST00000254667 TVP23CQ96ET8 276 aa16.75■□□□□ 0.27
PTPRE-201ENST00000254667 SEMG1P04279 462 aa16.75■□□□□ 0.27
PTPRE-201ENST00000254667 SAT2Q96F10 170 aaPredicted RBP16.75■□□□□ 0.27
PTPRE-201ENST00000254667 LRRC37AA6NMS7 1700 aa16.75■□□□□ 0.27
PTPRE-201ENST00000254667 AKR7A2O43488 359 aa16.75■□□□□ 0.27
PTPRE-201ENST00000254667 IL13RA2Q14627 380 aa16.75■□□□□ 0.27
PTPRE-201ENST00000254667 FRRS1LQ9P0K9 344 aa16.75■□□□□ 0.27
PTPRE-201ENST00000254667 TRPM6Q9BX84 2022 aa16.75■□□□□ 0.27
PTPRE-201ENST00000254667 UQCC3Q6UW78 93 aa16.75■□□□□ 0.27
PTPRE-201ENST00000254667 RNF133Q8WVZ7 376 aa16.75■□□□□ 0.27
PTPRE-201ENST00000254667 V9GYS6 101 aa16.75■□□□□ 0.27
PTPRE-201ENST00000254667 HYAL3O43820 417 aaPredicted RBP16.74■□□□□ 0.27
PTPRE-201ENST00000254667 INO80CQ6PI98 192 aaPredicted RBP16.74■□□□□ 0.27
PTPRE-201ENST00000254667 ZNF574Q6ZN55 896 aaPredicted RBP16.74■□□□□ 0.27
PTPRE-201ENST00000254667 GMPPAQ96IJ6 420 aaPredicted RBP16.74■□□□□ 0.27
PTPRE-201ENST00000254667 TMEM231Q9H6L2 316 aa16.74■□□□□ 0.27
PTPRE-201ENST00000254667 ZNF107Q9UII5 783 aaPredicted RBP16.74■□□□□ 0.27
PTPRE-201ENST00000254667 LSM2Q9Y333 95 aaKnown RBP16.74■□□□□ 0.27
PTPRE-201ENST00000254667 A0A1W2PN81 502 aa16.74■□□□□ 0.27
PTPRE-201ENST00000254667 GREM1O60565 184 aa16.74■□□□□ 0.27
PTPRE-201ENST00000254667 CTSDP07339 412 aaPredicted RBP16.74■□□□□ 0.27
PTPRE-201ENST00000254667 SFTPCP11686 197 aa16.74■□□□□ 0.27
PTPRE-201ENST00000254667 CHRNA7P36544 502 aa16.74■□□□□ 0.27
PTPRE-201ENST00000254667 MUC20Q8N307 709 aaPredicted RBP16.74■□□□□ 0.27
PTPRE-201ENST00000254667 CABLES2Q9BTV7 478 aa16.74■□□□□ 0.27
PTPRE-201ENST00000254667 OR2D2Q9H210 308 aa16.74■□□□□ 0.27
PTPRE-201ENST00000254667 COLQQ9Y215 455 aaPredicted RBP16.74■□□□□ 0.27
PTPRE-201ENST00000254667 SP1P08047 785 aa16.74■□□□□ 0.27
PTPRE-201ENST00000254667 IFI6P09912 130 aa16.74■□□□□ 0.27
PTPRE-201ENST00000254667 GZMMP51124 257 aa16.74■□□□□ 0.27
PTPRE-201ENST00000254667 SLC52A3Q9NQ40 469 aa16.74■□□□□ 0.27
PTPRE-201ENST00000254667 TMEM38BQ9NVV0 291 aa16.74■□□□□ 0.27
PTPRE-201ENST00000254667 SPAARA0A1B0GVQ0 90 aa16.74■□□□□ 0.27
PTPRE-201ENST00000254667 A0A1W2PPC1 479 aa16.74■□□□□ 0.27
PTPRE-201ENST00000254667 TRIM77I1YAP6 450 aa16.74■□□□□ 0.27
PTPRE-201ENST00000254667 OR3A1P47881 315 aa16.74■□□□□ 0.27
PTPRE-201ENST00000254667 SPRED2Q7Z698 418 aa16.74■□□□□ 0.27
PTPRE-201ENST00000254667 NTMQ9P121 344 aa16.74■□□□□ 0.27
PTPRE-201ENST00000254667 H3F3AP84243 136 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 TEX261Q6UWH6 196 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 LRRTM1Q86UE6 522 aa16.73■□□□□ 0.27
PTPRE-201ENST00000254667 TMEM52Q8NDY8 209 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms