RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 F8VVB4 439 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 F8VWA3 439 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 GNGT2O14610 69 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 FKBP6O75344 327 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 NXPH2O95156 264 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 PF4P02776 101 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 DYNLT3P51808 116 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 IL24Q13007 206 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 HABP2Q14520 560 aaPredicted RBP8.31□□□□□ -1.08
VPS50-201ENST00000251739 SNAPC1Q16533 368 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 AADACL4Q5VUY2 407 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 DTX3Q8N9I9 347 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 OR11H6Q8NGC7 330 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 OR4M1Q8NGD0 313 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 OR2T27Q8NH04 317 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 NRBF2Q96F24 287 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 FAM210AQ96ND0 272 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 MNTQ99583 582 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 ADGRL4Q9HBW9 690 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 GPR173Q9NS66 373 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 TVP23BQ9NYZ1 205 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 MRM2Q9UI43 246 aaKnown RBP8.31□□□□□ -1.08
VPS50-201ENST00000251739 IKZF2Q9UKS7 526 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 ZNF281Q9Y2X9 895 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 R4GMQ9 66 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 DNAH9Q9NYC9 4486 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 IGKV1-27A0A075B6S5 117 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 LOC110117498-PIK3R3F6TDL0 507 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 M0R129 80 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 MAGEB4O15481 346 aaPredicted RBP8.3□□□□□ -1.08
VPS50-201ENST00000251739 FAM107AO95990 144 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 PRB2P02812 416 aaPredicted RBP8.3□□□□□ -1.08
VPS50-201ENST00000251739 ZNF728P0DKX0 622 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 VSIG10L2P0DP72 767 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 CD28P10747 220 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 PIPP12273 146 aaPredicted RBP8.3□□□□□ -1.08
VPS50-201ENST00000251739 EPHA2P29317 976 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 DAPP51397 102 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 CXCR4P61073 352 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 CBX1P83916 185 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 FLOT2Q14254 428 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 PTGES3Q15185 160 aaKnown RBP8.3□□□□□ -1.08
VPS50-201ENST00000251739 BCL2L15Q5TBC7 163 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 SLX4IPQ5VYV7 408 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 PLEKHG7Q6ZR37 379 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 REC114Q7Z4M0 266 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 BCDIN3DQ7Z5W3 292 aaKnown RBP8.3□□□□□ -1.08
VPS50-201ENST00000251739 APOL4Q9BPW4 351 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 THTPAQ9BU02 230 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 TEX12Q9BXU0 123 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 SEBOXQ9HB31 216 aaPredicted RBP8.3□□□□□ -1.08
VPS50-201ENST00000251739 PAPOLBQ9NRJ5 636 aaKnown RBP8.3□□□□□ -1.08
VPS50-201ENST00000251739 CLN6Q9NWW5 311 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 MTCH1Q9NZJ7 389 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 OR14J1Q9UGF5 321 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 OR52A1Q9UKL2 312 aa8.3□□□□□ -1.08
VPS50-201ENST00000251739 TMEM82A0PJX8 343 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 ZAR1LA6NP61 321 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 FAM90A22PA8MWA6 464 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 IGHV1-8P0DP01 117 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 RAB13P51153 203 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 LGALS4P56470 323 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 ESRRGP62508 458 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 COL10A1Q03692 680 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 MEF2CQ06413 473 aaPredicted RBP8.29□□□□□ -1.08
VPS50-201ENST00000251739 CNN3Q15417 329 aaKnown RBP8.29□□□□□ -1.08
VPS50-201ENST00000251739 NXNL2Q5VZ03 156 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 C12orf73Q69YU5 71 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 ASRGL1Q7L266 308 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 MEPCEQ7L2J0 689 aaKnown RBP8.29□□□□□ -1.08
VPS50-201ENST00000251739 SSX6Q7RTT6 188 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 ANGPTL5Q86XS5 388 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 TMEM219Q86XT9 240 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 NDUFA11Q86Y39 141 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 SLC35F2Q8IXU6 374 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 OR8H2Q8N162 312 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 LYG1Q8N1E2 194 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 BATF2Q8N1L9 274 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 CCDC197Q8NCU1 140 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 TMEM163Q8TC26 289 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 RPS4Y2Q8TD47 263 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 MALSU1Q96EH3 234 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 CHST5Q9GZS9 411 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 MMP28Q9H239 520 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 SNX5Q9Y5X3 404 aa8.29□□□□□ -1.08
VPS50-201ENST00000251739 A6NIN4 97 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 PIN1P1O15428 100 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 XPNPEP2O43895 674 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 MITFO75030 526 aaPredicted RBP8.28□□□□□ -1.08
VPS50-201ENST00000251739 JUNBP17275 347 aaPredicted RBP8.28□□□□□ -1.08
VPS50-201ENST00000251739 ISL1P61371 349 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 UBE2V2Q15819 145 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 FAM189A2Q15884 450 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 SSX2Q16385 188 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 PLA1AQ53H76 456 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 MINOS1Q5TGZ0 78 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 SPATA24Q86W54 205 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 CATSPERDQ86XM0 798 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 ZDHHC13Q8IUH4 622 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 TCEANCQ8N8B7 351 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms