RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 BCL3P20749 454 aa15.86■□□□□ 0.13
HOXC11-201ENST00000243082 SEC61A1P61619 476 aaKnown RBP15.86■□□□□ 0.13
HOXC11-201ENST00000243082 FOXF2Q12947 444 aa15.86■□□□□ 0.13
HOXC11-201ENST00000243082 TSC22D1Q15714 1073 aa15.86■□□□□ 0.13
HOXC11-201ENST00000243082 ELP2Q6IA86 826 aa15.86■□□□□ 0.13
HOXC11-201ENST00000243082 LPCAT3Q6P1A2 487 aa15.86■□□□□ 0.13
HOXC11-201ENST00000243082 TMEM200AQ86VY9 491 aa15.86■□□□□ 0.13
HOXC11-201ENST00000243082 ZNF680Q8NEM1 530 aa15.86■□□□□ 0.13
HOXC11-201ENST00000243082 OR6K3Q8NGY3 331 aa15.86■□□□□ 0.13
HOXC11-201ENST00000243082 CASTOR1Q8WTX7 329 aa15.86■□□□□ 0.13
HOXC11-201ENST00000243082 PHB2Q99623 299 aa15.86■□□□□ 0.13
HOXC11-201ENST00000243082 DPCDQ9BVM2 203 aaPredicted RBP15.86■□□□□ 0.13
HOXC11-201ENST00000243082 PROB1E7EW31 1015 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 F8VVB4 439 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 F8VWA3 439 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 CCSO14618 274 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 IL32P24001 234 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 OPRM1P35372 400 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 BAMBIQ13145 260 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 SPATA46Q5T0L3 261 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 OR2T2Q6IF00 324 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 Q6ZS92 163 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 SCGB3A2Q96PL1 93 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 HS3ST6Q96QI5 342 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 HIST1H2AAQ96QV6 131 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 COL25A1Q9BXS0 654 aaPredicted RBP15.85■□□□□ 0.13
HOXC11-201ENST00000243082 MTCH1Q9NZJ7 389 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 MPC1Q9Y5U8 109 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 TRAV14DV4A0A0A6YYC5 116 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 ANKRD30BLA7E2S9 258 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 J3QW42 95 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 SNAPC5O75971 98 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 CD8AP01732 235 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 PI3P19957 117 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 COX5AP20674 150 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 FUT3P21217 361 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 IDH3GP51553 393 aaPredicted RBP15.85■□□□□ 0.13
HOXC11-201ENST00000243082 SORDQ00796 357 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 OPCMLQ14982 345 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 BOD1Q96IK1 185 aa15.85■□□□□ 0.13
HOXC11-201ENST00000243082 DBX1A6NMT0 343 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 L7N2F9 121 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 SMPD2O60906 423 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 S100A1P23297 94 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 PMELP40967 661 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 ARPC4P59998 168 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 NSUN5P2Q63ZY6 315 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 ZNF660Q6AZW8 331 aaPredicted RBP15.84■□□□□ 0.13
HOXC11-201ENST00000243082 OR2A2Q6IF42 318 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 ZNF585AQ6P3V2 769 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 INO80CQ6PI98 192 aaPredicted RBP15.84■□□□□ 0.13
HOXC11-201ENST00000243082 FBXW12Q6X9E4 464 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 PLSCR4Q9NRQ2 329 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 FXYD6-FXYD2A0A087WZ82 144 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 FAM221AA4D161 298 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 FAM90A10PA6NDY2 464 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 FAM90A18PA6NE21 464 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 FAM90A16PA6NEW6 464 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 FAM90A20PA6NIJ5 464 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 FAM90A8PA6NJQ4 464 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 FAM90A7PA6NKC0 464 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 RFPL4AA6NLU0 287 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 FAM90A22PA8MWA6 464 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 FAM90A12PA8MX19 464 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 FAM90A5PA8MXJ8 464 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 FAM90A23PA8MXZ1 464 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 RFPL4AL1F8VTS6 287 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 K7EM74 188 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 ARPC5O15511 151 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 OR7C1O76099 320 aaPredicted RBP15.84■□□□□ 0.13
HOXC11-201ENST00000243082 FAM90A15PP0C7V4 464 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 FAM90A13PP0C7W8 464 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 FAM90A14PP0C7W9 464 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 FAM90A24PP0C7X0 464 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 HOXB1P14653 301 aaPredicted RBP15.84■□□□□ 0.13
HOXC11-201ENST00000243082 GLRA1P23415 457 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 FGF12P61328 243 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 SUPT4H1P63272 117 aaKnown RBP15.84■□□□□ 0.13
HOXC11-201ENST00000243082 SURF2Q15527 256 aaPredicted RBP15.84■□□□□ 0.13
HOXC11-201ENST00000243082 Q6ZPA2 131 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 MKXQ8IYA7 352 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 FXYD6Q9H0Q3 95 aa15.84■□□□□ 0.13
HOXC11-201ENST00000243082 CACNA1GO43497 2377 aa15.83■□□□□ 0.13
HOXC11-201ENST00000243082 M0R233 179 aa15.83■□□□□ 0.12
HOXC11-201ENST00000243082 SYNGR1O43759 233 aa15.83■□□□□ 0.12
HOXC11-201ENST00000243082 NOS1APO75052 506 aaPredicted RBP15.83■□□□□ 0.12
HOXC11-201ENST00000243082 SFT2D2O95562 160 aa15.83■□□□□ 0.12
HOXC11-201ENST00000243082 MRPL49Q13405 166 aaKnown RBP15.83■□□□□ 0.12
HOXC11-201ENST00000243082 NHLRC3Q5JS37 347 aa15.83■□□□□ 0.12
HOXC11-201ENST00000243082 SEM1Q6ZVN7 128 aa15.83■□□□□ 0.12
HOXC11-201ENST00000243082 KCTD9Q7L273 389 aa15.83■□□□□ 0.12
HOXC11-201ENST00000243082 RBMXL3Q8N7X1 1067 aaKnown RBP15.83■□□□□ 0.12
HOXC11-201ENST00000243082 WDR31Q8NA23 367 aa15.83■□□□□ 0.12
HOXC11-201ENST00000243082 SEC22AQ96IW7 307 aa15.83■□□□□ 0.12
HOXC11-201ENST00000243082 ZNF2Q9BSG1 426 aaPredicted RBP15.83■□□□□ 0.12
HOXC11-201ENST00000243082 CLEC4MQ9H2X3 399 aaPredicted RBP15.83■□□□□ 0.12
HOXC11-201ENST00000243082 LIME1Q9H400 295 aa15.83■□□□□ 0.12
HOXC11-201ENST00000243082 CDH20Q9HBT6 801 aa15.83■□□□□ 0.12
HOXC11-201ENST00000243082 BOD1L1Q8NFC6 3051 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 ERVH48-1M5A8F1 160 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms