RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 MPV17LQ2QL34 196 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 FAM76BQ5HYJ3 339 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 CHST4Q8NCG5 386 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 TMEM104Q8NE00 496 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 RNASE6Q93091 150 aaKnown RBP11.29□□□□□ -0.6
SLIRP-201ENST00000238688 MS4A3Q96HJ5 214 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 NEDD4LQ96PU5 975 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 SPACA5Q96QH8 159 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 PRRT1Q99946 306 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 NGBQ9NPG2 151 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 CRIM1Q9NZV1 1036 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 SCP2D1Q9UJQ7 156 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 EDARQ9UNE0 448 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 POLDIP2Q9Y2S7 368 aa11.29□□□□□ -0.6
SLIRP-201ENST00000238688 IGHV2OR16-5A0A0B4J2B6 119 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 LINC00854A0A1B0GVQ3 168 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 C7orf66A4D0T2 115 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 LRP5LA4QPB2 252 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 ZNF736B4DX44 427 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-201ENST00000238688 C16orf97H3BN30 126 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 CRYAAP02489 173 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 CCL2P13500 99 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 SPNP16150 400 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 SERPINA2P20848 420 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 DTYMKP23919 212 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 TAS2R46P59540 309 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 C11orf91Q3C1V1 193 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 OR10K2Q6IF99 312 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 STEAP1BQ6NZ63 245 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 SPNS3Q6ZMD2 512 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 BIVMQ86UB2 503 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 AKAP14Q86UN6 197 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 OSR2Q8N2R0 312 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 ZNF611Q8N823 705 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 OR1J1Q8NGS3 322 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 OR51F2Q8NH61 342 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 NPRL2Q8WTW4 380 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 ST8SIA4Q92187 359 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 GTF3AQ92664 365 aaKnown RBP11.28□□□□□ -0.6
SLIRP-201ENST00000238688 LRRC46Q96FV0 321 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 MARS2Q96GW9 593 aaKnown RBP11.28□□□□□ -0.6
SLIRP-201ENST00000238688 TRAF4Q9BUZ4 470 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-201ENST00000238688 SELENOIQ9C0D9 397 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 LIME1Q9H400 295 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 ELL3Q9HB65 397 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-201ENST00000238688 IFT46Q9NQC8 304 aa11.28□□□□□ -0.6
SLIRP-201ENST00000238688 SETD2Q9BYW2 2564 aaPredicted RBP11.27□□□□□ -0.6
SLIRP-201ENST00000238688 IGKV1-27A0A075B6S5 117 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 IGHV1-18A0A0C4DH31 117 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 TMEM235A6NFC5 223 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 HMX3A6NHT5 357 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 DISC1C4P0D8 188 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 J3QT63 122 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 PEX14O75381 377 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 NDUFB6O95139 128 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 GIFP27352 417 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 BLVRBP30043 206 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-201ENST00000238688 GCH1P30793 250 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 RBM11P57052 281 aaKnown RBP11.27□□□□□ -0.61
SLIRP-201ENST00000238688 FGF12P61328 243 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 NAAAQ02083 359 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 MADCAM1Q13477 382 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 IL13RA2Q14627 380 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 HLXQ14774 488 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-201ENST00000238688 SRSF7Q16629 238 aaKnown RBP eCLIP11.27□□□□□ -0.61
SLIRP-201ENST00000238688 TATDN3Q17R31 274 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 ARRDC1Q8N5I2 433 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 OR8S1Q8NH09 359 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 KLF14Q8TD94 323 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-201ENST00000238688 HPSE2Q8WWQ2 592 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 S100PBPQ96BU1 408 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 UPRTQ96BW1 309 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 CMBLQ96DG6 245 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 NEURL2Q9BR09 285 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 ALX4Q9H161 411 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-201ENST00000238688 KCNK15Q9H427 330 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 IFT22Q9H7X7 185 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 MYOZ1Q9NP98 299 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-201ENST00000238688 NUDT15Q9NV35 164 aa11.27□□□□□ -0.61
SLIRP-201ENST00000238688 MAP1AP78559 2803 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-201ENST00000238688 ZFHX3Q15911 3703 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 ROS1P08922 2347 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 ZNF732B4DXR9 585 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 TRAPPC2LH3BP13 241 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 SSX4O60224 188 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 HTR3BO95264 441 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 RAB3DO95716 219 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 IL5P05113 134 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 H2AFB2P0C5Z0 115 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 PTAFRP25105 342 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 GLRXP35754 106 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 ECI1P42126 302 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 SRP9P49458 86 aaKnown RBP11.26□□□□□ -0.61
SLIRP-201ENST00000238688 MRPS15P82914 257 aaKnown RBP11.26□□□□□ -0.61
SLIRP-201ENST00000238688 CDK10Q15131 360 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 MOGAT2Q3SYC2 334 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 RNASE10Q5GAN6 216 aaKnown RBP11.26□□□□□ -0.61
SLIRP-201ENST00000238688 VAX1Q5SQQ9 334 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 METTL11BQ5VVY1 283 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 C1QL2Q7Z5L3 287 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms