RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 RFNGQ9Y644 331 aa13.52□□□□□ -0.25
DDX55-201ENST00000238146 IGHV1OR21-1A0A087WYE8 117 aa13.51□□□□□ -0.25
DDX55-201ENST00000238146 CCDC187A0A096LP49 1063 aa13.51□□□□□ -0.25
DDX55-201ENST00000238146 GPR37O15354 613 aa13.51□□□□□ -0.25
DDX55-201ENST00000238146 ANGPTL7O43827 346 aa13.51□□□□□ -0.25
DDX55-201ENST00000238146 LSM6P62312 80 aaKnown RBP13.51□□□□□ -0.25
DDX55-201ENST00000238146 ANKRD37Q7Z713 158 aa13.51□□□□□ -0.25
DDX55-201ENST00000238146 LRRC18Q8N456 261 aa13.51□□□□□ -0.25
DDX55-201ENST00000238146 OR5L1Q8NGL2 311 aa13.51□□□□□ -0.25
DDX55-201ENST00000238146 SLC22A8Q8TCC7 542 aa13.51□□□□□ -0.25
DDX55-201ENST00000238146 RCL1Q9Y2P8 373 aaKnown RBP13.51□□□□□ -0.25
DDX55-201ENST00000238146 NOSIPQ9Y314 301 aaKnown RBP13.51□□□□□ -0.25
DDX55-201ENST00000238146 ZNF729A6NN14 1252 aaPredicted RBP13.51□□□□□ -0.25
DDX55-201ENST00000238146 WRBO00258 174 aa13.51□□□□□ -0.25
DDX55-201ENST00000238146 CD38P28907 300 aa13.51□□□□□ -0.25
DDX55-201ENST00000238146 CLDN17P56750 224 aa13.51□□□□□ -0.25
DDX55-201ENST00000238146 PYY3Q5JQD4 70 aa13.51□□□□□ -0.25
DDX55-201ENST00000238146 SMDT1Q9H4I9 107 aa13.51□□□□□ -0.25
DDX55-201ENST00000238146 MMP24Q9Y5R2 645 aa13.51□□□□□ -0.25
DDX55-201ENST00000238146 TRBV11-1A0A0K0K1C0 115 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 A0A1W2PR77 199 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 LMO7DNF2Z398 122 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 NDUFS6O75380 124 aaKnown RBP13.5□□□□□ -0.25
DDX55-201ENST00000238146 MSR1P21757 451 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 CHAF1BQ13112 559 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 ENDOGQ14249 297 aaKnown RBP13.5□□□□□ -0.25
DDX55-201ENST00000238146 TMEM176BQ3YBM2 270 aaPredicted RBP13.5□□□□□ -0.25
DDX55-201ENST00000238146 CDCP2Q5VXM1 449 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 ZNF574Q6ZN55 896 aaPredicted RBP13.5□□□□□ -0.25
DDX55-201ENST00000238146 Q6ZSR3 168 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 GJC3Q8NFK1 279 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 OR10G3Q8NGC4 313 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 ZNF501Q96CX3 271 aaPredicted RBP13.5□□□□□ -0.25
DDX55-201ENST00000238146 ABHD14AQ9BUJ0 271 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 GPR173Q9NS66 373 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 FGF21Q9NSA1 209 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 HSF4Q9ULV5 492 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 TRIOO75962 3097 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 ZNF727A8MUV8 499 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 DBHP09172 617 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 CDX1P47902 265 aaPredicted RBP13.5□□□□□ -0.25
DDX55-201ENST00000238146 MTCP1P56278 107 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 EWSR1Q01844 656 aaKnown RBP eCLIP13.5□□□□□ -0.25
DDX55-201ENST00000238146 LGI3Q8N145 548 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 OR11L1Q8NGX0 322 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 DYRK2Q92630 601 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 TPSD1Q9BZJ3 242 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 SHANK1Q9Y566 2161 aa13.5□□□□□ -0.25
DDX55-201ENST00000238146 EYSQ5T1H1 3165 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 IGLV3-32A0A0A0MS00 114 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 AQP7P3A6NL99 342 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 SPRY1O43609 319 aaPredicted RBP13.49□□□□□ -0.25
DDX55-201ENST00000238146 DTYMKP23919 212 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 ITGA3P26006 1051 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 HAAOP46952 286 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 AFF3P51826 1226 aaKnown RBP13.49□□□□□ -0.25
DDX55-201ENST00000238146 HIKESHIQ53FT3 197 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 C9orf152Q5JTZ5 239 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 PHYHD1Q5SRE7 291 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 PLXDC1Q8IUK5 500 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 C20orf196Q8IYI0 205 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 BOD1Q96IK1 185 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 METTL7AQ9H8H3 244 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 B3GALT1Q9Y5Z6 326 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 RBFOX3A6NFN3 312 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 H3BQ15 152 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 TLX3O43711 291 aaPredicted RBP13.49□□□□□ -0.25
DDX55-201ENST00000238146 OTX1P32242 354 aaPredicted RBP13.49□□□□□ -0.25
DDX55-201ENST00000238146 GUCA1AP43080 201 aaPredicted RBP13.49□□□□□ -0.25
DDX55-201ENST00000238146 FAM69BQ5VUD6 431 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 SPSB3Q6PJ21 355 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 BRICD5Q6PL45 260 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 OR4D5Q8NGN0 318 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 ANGPTL4Q9BY76 406 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 TGIF2Q9GZN2 237 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 METTL9Q9H1A3 318 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 NELFAQ9H3P2 528 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 TREM2Q9NZC2 230 aa13.49□□□□□ -0.25
DDX55-201ENST00000238146 FAM221AA4D161 298 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 CDRT15L2A8MXV6 281 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 SLC34A2O95436 690 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 HEXBP07686 556 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 RSU1Q15404 277 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 OR2M3Q8NG83 312 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 OR2G3Q8NGZ4 309 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 RAB39BQ96DA2 213 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 DOK5Q9P104 306 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 LOC102725191A0A1B0GVB3 256 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 FAM24AA6NFZ4 105 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 M0R135 149 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 PHF1O43189 567 aaPredicted RBP13.48□□□□□ -0.25
DDX55-201ENST00000238146 ATP6V0CP27449 155 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 NDUFA6P56556 154 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 GNMTQ14749 295 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 HAGHQ16775 308 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 SNAI3Q3KNW1 292 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 CDPF1Q6NVV7 123 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 SLC22A25Q6T423 547 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 CARFQ8N187 725 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 FBXL14Q8N1E6 418 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms