RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 MPTX1A8MV57 137 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 FAM90A22PA8MWA6 464 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 FAM90A12PA8MX19 464 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 FAM90A5PA8MXJ8 464 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 FAM90A23PA8MXZ1 464 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 PRSS44E7EML9 344 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 SS18L1O75177 396 aaPredicted RBP13.97□□□□□ -0.17
UBE3D-201ENST00000237186 PDCD6O75340 191 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 TNFSF15O95150 251 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 ACTL6AO96019 429 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 PLATP00750 562 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 FAM90A15PP0C7V4 464 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 FAM90A13PP0C7W8 464 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 FAM90A14PP0C7W9 464 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 FAM90A24PP0C7X0 464 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 NUP62P37198 522 aaPredicted RBP13.97□□□□□ -0.17
UBE3D-201ENST00000237186 SNTB1Q13884 538 aaKnown RBP13.97□□□□□ -0.17
UBE3D-201ENST00000237186 PIGYQ3MUY2 71 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 TMEM211Q6ICI0 200 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 DHRS13Q6UX07 377 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 SGPP2Q8IWX5 399 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 C17orf50Q8WW18 174 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 DCUN1D4Q92564 292 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 RRNAD1Q96FB5 475 aaKnown RBP13.97□□□□□ -0.17
UBE3D-201ENST00000237186 AQP10Q96PS8 301 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 METTL8Q9H825 291 aaKnown RBP13.97□□□□□ -0.17
UBE3D-201ENST00000237186 CALHM2Q9HA72 323 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 DNAJB11Q9UBS4 358 aa13.97□□□□□ -0.17
UBE3D-201ENST00000237186 PQLC2LA1A4F0 135 aa13.96□□□□□ -0.17
UBE3D-201ENST00000237186 KLRC4-KLRK1H3BQV0 150 aa13.96□□□□□ -0.17
UBE3D-201ENST00000237186 KNG1P01042 644 aa13.96□□□□□ -0.17
UBE3D-201ENST00000237186 ARR3P36575 388 aa13.96□□□□□ -0.17
UBE3D-201ENST00000237186 RRADP55042 308 aa13.96□□□□□ -0.17
UBE3D-201ENST00000237186 RBM11P57052 281 aaKnown RBP13.96□□□□□ -0.17
UBE3D-201ENST00000237186 PLGLB1Q02325 96 aa13.96□□□□□ -0.17
UBE3D-201ENST00000237186 TUSC1Q2TAM9 212 aa13.96□□□□□ -0.17
UBE3D-201ENST00000237186 HES3Q5TGS1 186 aa13.96□□□□□ -0.17
UBE3D-201ENST00000237186 SAXO1Q8IYX7 474 aa13.96□□□□□ -0.17
UBE3D-201ENST00000237186 ZFP62Q8NB50 900 aaPredicted RBP13.96□□□□□ -0.17
UBE3D-201ENST00000237186 SLC30A7Q8NEW0 376 aa13.96□□□□□ -0.17
UBE3D-201ENST00000237186 APH1AQ96BI3 265 aa13.96□□□□□ -0.17
UBE3D-201ENST00000237186 CCDC120Q96HB5 630 aa13.96□□□□□ -0.17
UBE3D-201ENST00000237186 PRRG4Q9BZD6 226 aa13.96□□□□□ -0.17
UBE3D-201ENST00000237186 SHARPINQ9H0F6 387 aa13.96□□□□□ -0.17
UBE3D-201ENST00000237186 LIME1Q9H400 295 aa13.96□□□□□ -0.17
UBE3D-201ENST00000237186 CYTL1Q9NRR1 136 aa13.96□□□□□ -0.17
UBE3D-201ENST00000237186 ZNF850A8MQ14 1090 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 CST4P01036 141 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 PET100P0DJ07 73 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 FUT3P21217 361 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 RBMXP38159 391 aaKnown RBP13.95□□□□□ -0.18
UBE3D-201ENST00000237186 MEOX1P50221 254 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 NUBP1P53384 320 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 DAZAP2Q15038 168 aaPredicted RBP13.95□□□□□ -0.18
UBE3D-201ENST00000237186 ELP2Q6IA86 826 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 TMEM200AQ86VY9 491 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 CALHM1Q8IU99 346 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 APOBEC3DQ96AK3 386 aaPredicted RBP13.95□□□□□ -0.18
UBE3D-201ENST00000237186 GALNT14Q96FL9 552 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 PRR13Q9NZ81 148 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 GPR160Q9UJ42 338 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 MEMO1Q9Y316 297 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 TPD52L2O43399 206 aaKnown RBP13.95□□□□□ -0.18
UBE3D-201ENST00000237186 SCO1O75880 301 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 HLA-HP01893 362 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 TPT1P13693 172 aaKnown RBP13.95□□□□□ -0.18
UBE3D-201ENST00000237186 OPRM1P35372 400 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 FOXG1P55316 489 aaPredicted RBP13.95□□□□□ -0.18
UBE3D-201ENST00000237186 UCP3P55916 312 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 PPIAP62937 165 aaKnown RBP13.95□□□□□ -0.18
UBE3D-201ENST00000237186 MALLQ13021 153 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 RBM39Q14498 530 aaKnown RBP13.95□□□□□ -0.18
UBE3D-201ENST00000237186 FAM74A1Q5RGS3 127 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 ZNF611Q8N823 705 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 OPA3Q9H6K4 179 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 TMA7Q9Y2S6 64 aaKnown RBP13.95□□□□□ -0.18
UBE3D-201ENST00000237186 MYO7BQ6PIF6 2116 aa13.95□□□□□ -0.18
UBE3D-201ENST00000237186 A0A096LPE4 126 aa13.94□□□□□ -0.18
UBE3D-201ENST00000237186 A0A1W2PPZ6 126 aa13.94□□□□□ -0.18
UBE3D-201ENST00000237186 FGF16O43320 207 aa13.94□□□□□ -0.18
UBE3D-201ENST00000237186 SOX8P57073 446 aa13.94□□□□□ -0.18
UBE3D-201ENST00000237186 RAB32Q13637 225 aa13.94□□□□□ -0.18
UBE3D-201ENST00000237186 SLC10A1Q14973 349 aa13.94□□□□□ -0.18
UBE3D-201ENST00000237186 SRSF7Q16629 238 aaKnown RBP eCLIP13.94□□□□□ -0.18
UBE3D-201ENST00000237186 Q6ZS49 121 aa13.94□□□□□ -0.18
UBE3D-201ENST00000237186 DPPA2Q7Z7J5 298 aa13.94□□□□□ -0.18
UBE3D-201ENST00000237186 OR56B2PQ8NGI1 322 aa13.94□□□□□ -0.18
UBE3D-201ENST00000237186 POM121L2Q96KW2 1035 aa13.94□□□□□ -0.18
UBE3D-201ENST00000237186 ZNF286AQ9HBT8 521 aa13.94□□□□□ -0.18
UBE3D-201ENST00000237186 C12orf4Q9NQ89 552 aa13.94□□□□□ -0.18
UBE3D-201ENST00000237186 OR5AC2Q9NZP5 309 aa13.94□□□□□ -0.18
UBE3D-201ENST00000237186 C5orf49A4QMS7 147 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 ZNF503-AS2A6NEH8 195 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 HOXB5P09067 269 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 CD46P15529 392 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 RAB1AP62820 205 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 SLC25A26Q70HW3 274 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 BAP18Q8IXM2 172 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 GALNT11Q8NCW6 608 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 PLSCR2Q9NRY7 297 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms