RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 SH3BGRL3Q9H299 93 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 C19orf53Q9UNZ5 99 aaPredicted RBP11.45□□□□□ -0.58
VAMP4-201ENST00000236192 A0A0B4J2E0 115 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 UBE2L5PA0A1B0GUS4 154 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 A0A1B0GX12 115 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 PIN1P1O15428 100 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 NTN1O95631 604 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 FBLP22087 321 aaKnown RBP11.44□□□□□ -0.58
VAMP4-201ENST00000236192 PLCXD2Q0VAA5 305 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 ZNF558Q96NG5 402 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 OR1A1Q9P1Q5 309 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 RBPJLQ9UBG7 517 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 HLA-GP17693 338 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 PPOXP50336 477 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 ZNF595Q8IYB9 648 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 TTC9BQ8N6N2 239 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 OR51E1Q8TCB6 317 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 SPACA5Q96QH8 159 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 VDAC3Q9Y277 283 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 A0A1W2PPC1 479 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 SNURFLB1AK76 121 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 VAX1Q5SQQ9 334 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 ASTLQ6HA08 431 aaPredicted RBP11.44□□□□□ -0.58
VAMP4-201ENST00000236192 DEC1Q9P2X7 70 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 H3BP45 60 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 ZNF264O43296 627 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 DDNO94850 711 aaPredicted RBP11.44□□□□□ -0.58
VAMP4-201ENST00000236192 KIR3DL2P43630 455 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 CRYBA2P53672 197 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 NANOS3P60323 173 aaKnown RBP11.44□□□□□ -0.58
VAMP4-201ENST00000236192 NR0B2Q15466 257 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 MMDQ15546 238 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 LIAT1Q6ZQX7 453 aa11.44□□□□□ -0.58
VAMP4-201ENST00000236192 VSTM2BA6NLU5 285 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 ADAM20O43506 726 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 SYNGR4O95473 234 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 CTSSP25774 331 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 OR1N1Q8NGS0 311 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 CD99L2Q8TCZ2 262 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.43□□□□□ -0.58
VAMP4-201ENST00000236192 TRBV5-5A0A0J9YX44 114 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 EDDM13A0A1B0GTR0 161 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 SLC22A20A6NK97 555 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 OR7C1O76099 320 aaPredicted RBP11.43□□□□□ -0.58
VAMP4-201ENST00000236192 ITGBL1O95965 494 aaPredicted RBP11.43□□□□□ -0.58
VAMP4-201ENST00000236192 MELTFP08582 738 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 FABP2P12104 132 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 RPL18Q07020 188 aaKnown RBP11.43□□□□□ -0.58
VAMP4-201ENST00000236192 SMIM21Q3B7S5 101 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 ANKRD55Q3KP44 614 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 SGMS2Q8NHU3 365 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 RNF126Q9BV68 326 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 TMEM106BQ9NUM4 274 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 TMEM30AQ9NV96 361 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 LRP12Q9Y561 859 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 SMPD2O60906 423 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 APBB3O95704 486 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 GCH1P30793 250 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 OPRM1P35372 400 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 IER3P46695 156 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 RFLNBQ8N5W9 214 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 SIGMAR1Q99720 223 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 S1PR5Q9H228 398 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 TMEM242Q9NWH2 141 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 FOXD3Q9UJU5 478 aaPredicted RBP11.43□□□□□ -0.58
VAMP4-201ENST00000236192 ABT1Q9ULW3 272 aaKnown RBP11.43□□□□□ -0.58
VAMP4-201ENST00000236192 SSC5DA1L4H1 1573 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 TRAV30A0A087WSZ9 112 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 LCN2P80188 198 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 ADAMTS18Q8TE60 1221 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 GMPPAQ96IJ6 420 aaPredicted RBP11.43□□□□□ -0.58
VAMP4-201ENST00000236192 PBOV1Q9GZY1 135 aa11.43□□□□□ -0.58
VAMP4-201ENST00000236192 TMEM265A0A087WTH1 108 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 C3orf85A0A1B0GTC6 90 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 SIRPB1O00241 398 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 PDE6DO43924 150 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 CDC14BO60729 498 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 NXPH2O95156 264 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 MT-ATP6P00846 226 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 SLC25A34Q6PIV7 304 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 CDC20BQ86Y33 519 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 D2HGDHQ8N465 521 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 GBGT1Q8N5D6 347 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 OR10S1Q8NGN2 331 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 WDR34Q96EX3 536 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 SERTAD3Q9UJW9 196 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 C11orf94C9JXX5 98 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 FAM157CP0CG43 387 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 TMEM108Q6UXF1 575 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 MYPOPQ86VE0 399 aaPredicted RBP11.42□□□□□ -0.58
VAMP4-201ENST00000236192 CYTL1Q9NRR1 136 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 A0A1W2PRS3 328 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 PRSS37A4D1T9 235 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 BMPR1BO00238 502 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 BCAT2O15382 392 aaPredicted RBP11.42□□□□□ -0.58
VAMP4-201ENST00000236192 CTXN2P0C2S0 81 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 WNT5AP41221 380 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 WASP42768 502 aa11.42□□□□□ -0.58
VAMP4-201ENST00000236192 CNRIP1Q96F85 164 aaPredicted RBP11.42□□□□□ -0.58
VAMP4-201ENST00000236192 ZNFX1Q9P2E3 1918 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms