RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 MALSU1Q96EH3 234 aa12.81□□□□□ -0.36
PRDM4-201ENST00000228437 MARS2Q96GW9 593 aaKnown RBP12.81□□□□□ -0.36
PRDM4-201ENST00000228437 G6PC2Q9NQR9 355 aa12.81□□□□□ -0.36
PRDM4-201ENST00000228437 ARGFXA6NJG6 315 aa12.81□□□□□ -0.36
PRDM4-201ENST00000228437 PTBP3O95758 552 aaKnown RBP12.81□□□□□ -0.36
PRDM4-201ENST00000228437 GABRA4P48169 554 aa12.81□□□□□ -0.36
PRDM4-201ENST00000228437 MALLQ13021 153 aa12.81□□□□□ -0.36
PRDM4-201ENST00000228437 ASPHD2Q6ICH7 369 aa12.81□□□□□ -0.36
PRDM4-201ENST00000228437 TCTN2Q96GX1 697 aa12.81□□□□□ -0.36
PRDM4-201ENST00000228437 SLC39A9Q9NUM3 307 aa12.81□□□□□ -0.36
PRDM4-201ENST00000228437 IGHV3-64DA0A0J9YX35 117 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 SOD3P08294 240 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 BLKP51451 505 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 EWSR1Q01844 656 aaKnown RBP eCLIP12.8□□□□□ -0.36
PRDM4-201ENST00000228437 FOXF1Q12946 379 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 LINC00114Q6XXX2 140 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 LANCL3Q6ZV70 420 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 OR10AD1Q8NGE0 317 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 BMFQ96LC9 184 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 SHANK1Q9Y566 2161 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 NKX2-6A6NCS4 301 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 DYNLT3P51808 116 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 PMP22Q01453 160 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 PNLIPRP3Q17RR3 467 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 TMEM156Q8N614 296 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 HIST1H2BKO60814 126 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 HIST1H2BJP06899 126 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 SEC11BP0C7V7 166 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 SMIM10L1P0DMW3 83 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 MYF5P13349 255 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 HIST1H2BOP23527 126 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 HIST1H2BBP33778 126 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 P2RY1P47900 373 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 CSNK1A1P48729 337 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 HIST1H2BDP58876 126 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 HIST1H2BCP62807 126 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 ARL6IP1Q15041 203 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 HIST2H2BEQ16778 126 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.8□□□□□ -0.36
PRDM4-201ENST00000228437 DOK3Q7L591 496 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 HIST1H2BHQ93079 126 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 IL22RA2Q969J5 263 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 SMIM10Q96HG1 83 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 HIST1H2BNQ99877 126 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 HIST1H2BMQ99879 126 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 TGOLN2O43493 480 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 ADAM20O43506 726 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 IFNA1P01562 189 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 HBE1P02100 147 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 PNLIPP16233 465 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 HTR5AP47898 357 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 MMP16P51512 607 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 RAB4BP61018 213 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 SUPT4H1P63272 117 aaKnown RBP12.8□□□□□ -0.36
PRDM4-201ENST00000228437 C8orf44Q96CB5 159 aa12.8□□□□□ -0.36
PRDM4-201ENST00000228437 MYOZ1Q9NP98 299 aaPredicted RBP12.8□□□□□ -0.36
PRDM4-201ENST00000228437 DANCRP0C864 163 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 PARM1Q6UWI2 310 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 DMRTC2Q8IXT2 367 aaPredicted RBP12.79□□□□□ -0.36
PRDM4-201ENST00000228437 FBXL14Q8N1E6 418 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 ARHGEF39Q8N4T4 335 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 SLC39A7Q92504 469 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 NAA60Q9H7X0 242 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 RPS2P15880 293 aaKnown RBP12.79□□□□□ -0.36
PRDM4-201ENST00000228437 CLN3Q13286 438 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 TMEM41BQ5BJD5 291 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 PLCXD3Q63HM9 321 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 UNQ6494/PRO21346Q6UXR6 183 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 SLC35G3Q8N808 338 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 SAMD10Q9BYL1 202 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 OR14J1Q9UGF5 321 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 KIR2DS5A0A0G2JLQ3 304 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 A0A0G2JNG1 304 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 A0A1W2PNV4 684 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 KIR2DS3K7RE56 304 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 PATE4P0C8F1 98 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 KIR2DS5Q14953 304 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 LRRC75AQ8NAA5 344 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 LHX4Q969G2 390 aa12.79□□□□□ -0.36
PRDM4-201ENST00000228437 ZNF107Q9UII5 783 aaPredicted RBP12.79□□□□□ -0.36
PRDM4-201ENST00000228437 TIMM8BQ9Y5J9 83 aaPredicted RBP12.79□□□□□ -0.36
PRDM4-201ENST00000228437 FOXS1O43638 330 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 TK1P04183 234 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 RNF151Q2KHN1 245 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 TEX30Q5JUR7 227 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 SPANXN5Q5MJ07 72 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 BADQ92934 168 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 PLA2G2FQ9BZM2 168 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 WISP1O95388 367 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 HIST1H1BP16401 226 aaKnown RBP12.78□□□□□ -0.36
PRDM4-201ENST00000228437 CHRNA7P36544 502 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 ROM1Q03395 351 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 NCR3LG1Q68D85 454 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 IL22RA1Q8N6P7 574 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 ZNF665Q9H7R5 613 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 CALHM2Q9HA72 323 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 SLC2A9Q9NRM0 540 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 ANXA10Q9UJ72 324 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 FUT9Q9Y231 359 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 NOSIPQ9Y314 301 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms